Polyodon spathula (Mississippi paddlefish): 121322772
Help
Entry
121322772 CDS
T07273
Name
(RefSeq) rho guanine nucleotide exchange factor 26-like isoform X1
KO
K13744
Rho guanine nucleotide exchange factor 26
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa05100
Bacterial invasion of epithelial cells
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121322772
05100 Bacterial invasion of epithelial cells
121322772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121322772
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Macropinocytosis
Others
121322772
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121322772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SOS1_NGEF_PH
SH3_9
PH
SH3_2
RHG20_PH
PH_BUD3_C
ECT2_PH
PH_13
PH_19
DUF5514
Motif
Other DBs
NCBI-GeneID:
121322772
NCBI-ProteinID:
XP_041118996
LinkDB
All DBs
Position
11:complement(33400691..33434893)
Genome browser
AA seq
874 aa
AA seq
DB search
MEGGNGVDVSNTNIMPLWKRRSANHASSRDPSKPKPRALSYQIDGVMMTDFPIEDRCAFT
LTQPAAKIVASPGGSIFLKHVMSKPARAARVVRSISIGRLSNGKFSFAKRKSQDHKQVDS
HPPVTLEINKNSDIGSSSNEKTPSPDNKRDCQRKISSPLTSSTKESDQVVFNSGPGDLPA
RTAHTLSNNNDIVFQQAPPFLENIKKTSVSSPDEKVVFQRQLSTTSQSSDKIPSVILSTN
SPAALKMGMQQLIPKALASKVIKTSQNLLDPNNRIQRSLSAVETSNRPFFPVGDTERGTD
PELDSPGTLKRGLRTTSYRRAVVSGIDFDGASPNGKKGNRLSHPILKSVEEDKEKSFSLG
RDKKKGLPTQGTFDSEEDAVLYQNYKEKALHNDSDEDAEPKEQKSDERIVVQYKPLRSTW
GQLTVVRKSGPCQQLSQEERKRQETIFEVISSEHSYLHSLEILIRLFKNSSELNETMTKT
ENHHLFSNITDVYEASKKFFKELEERHQQNIVIDDVGDIVEKHATSTFDPYVKYCSNEVY
QQRTLQKLLTKNPSFKEVLSLIESNPDCRNLPMISFLILPMQRVTRLPLLMDTICQKTPK
DSHKYELCKSAFKAVSKLVRQCNEGARTMERTEMMYTINSRLEFKIKPFPLVSSSRWMVK
RGELTAFVEDNGIFLKRTSKQQVYFFLFNDVLIVTRKKSEESYNVIDYALRDQLSVGQCE
IEELNLSPVKTTSGMLYSRQGSANHVFKLAFTSNHSGEKVTMIMGAEFLNERARWITALG
ENSSDKQSIDRTTLTQVEITRTYTAKQLDELSLQVADVVLVYQKVNDGWYDGERLRDGER
GWFLSECAMAIKCQATIEKNVERMGRLLELEANV
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggggaatggtgtggatgtatccaacactaacatcatgcctctttggaaaaga
agatctgcaaaccatgctagctcaagagatcccagtaaacctaaacccagggctctcagt
taccagatcgacggggtcatgatgactgatttccccatagaggacagatgtgcctttacc
ttgacgcagccagctgcaaagatagttgcctccccgggagggtcaatatttctgaagcat
gtaatgagcaagcccgcccgtgcagctcgtgtagttcgcagtataagtattgggcgttta
tccaatggaaagttttctttcgctaagcggaaatcacaggaccacaaacaagtggatagc
catcctccagtgactttggaaattaataaaaacagtgacatcgggtcttcctctaatgag
aaaaccccatcccctgataacaaaagagattgtcagagaaagatctccagtcccctgaca
agctcgacaaaagaaagtgaccaggttgtttttaactccggtccaggagacttgcctgca
agaacagctcatacactttccaataacaatgacattgtattccagcaggcacctccgttt
cttgaaaacataaagaaaacttcagtgtcttccccagatgaaaaagtagttttccaaaga
cagctttccactacctcacagagctctgacaaaatcccatcggtaatattaagcaccaac
agtcctgcagccttaaagatgggaatgcagcagctcatacctaaagcactggcttcaaaa
gtgatcaagaccagccagaatctcttagaccccaataataggattcagcgttccctcagt
gcggtcgagaccagcaacaggccgtttttccctgtgggagatactgaacgggggacagac
ccagagttagacagccctgggaccctgaaacgagggctaaggaccacttcctaccgaaga
gcagttgtcagtgggatcgacttcgacggtgcttccccgaacgggaaaaagggaaacaga
ctgtcccatcccattctgaaatctgtggaggaggacaaggagaaaagtttcagtttggga
agggacaaaaagaagggattacctacgcagggcacttttgatagtgaagaagacgcggtg
ctgtatcagaactataaggaaaaagctttgcataacgattctgatgaggatgccgaaccc
aaggagcaaaaatctgatgaaaggattgttgttcaatacaagccattgcgatccacttgg
ggtcagctcactgtggtcagaaagagtggaccatgtcaacaattaagccaggaagagagg
aagagacaggagacaatttttgaagtgatttcatcggagcactcctacctgcacagtctc
gagattttgatacggttgtttaagaactccagtgaactcaacgaaacgatgaccaaaact
gagaatcatcacctcttctccaacatcaccgatgtctatgaggcaagcaaaaagttcttt
aaagagctggaggagaggcatcagcagaacattgtcatcgatgatgtcggtgatattgtt
gaaaagcatgccacgtcaacatttgacccctacgtgaagtactgctccaatgaagtttac
cagcagaggacactccagaagcttctaactaaaaatccctcctttaaggaagtcctgtct
ctaatcgagagcaacccagattgcaggaaccttcctatgatctctttccttattctccca
atgcagagagtcactcgtctgcctcttttaatggatactatctgtcagaaaacgccaaaa
gactcacacaagtatgaactctgcaaaagcgcatttaaggctgtcagcaagctggtccga
cagtgtaatgaaggagccaggacaatggagaggacagaaatgatgtatactataaactcc
cggctggaattcaagatcaagccatttcctctggtctcttcctcccgctggatggtgaag
cgaggggagctcactgccttcgtggaagacaacgggatcttcctgaagcgcacctcaaag
cagcaggtctacttcttcctgtttaacgatgtcctcattgttaccagaaagaaaagtgag
gaaagttataatgtcattgactatgcattgagagaccagctttctgtgggccagtgtgag
attgaggagctcaacctatcccctgtgaagacaacgtcagggatgctgtactcacgtcaa
ggatcggccaatcacgtcttcaaactggctttcactagcaaccactcaggagagaaggtg
acgatgattatgggagcagagtttcttaatgagagagctcgctggatcacagcgctggga
gaaaacagcagcgataagcagagcatagacagaacaacactgacccaggtggagattacg
agaacgtacactgcaaaacagctggatgaactttcacttcaggttgctgatgtggtgctg
gtttaccagaaagttaacgacggatggtatgacggtgagcgtctcagagatggagagaga
ggatggtttctctcagaatgtgcaatggcgattaagtgccaggcaacgattgagaagaac
gtggaaagaatgggccgtctgctggaacttgaagcaaacgtttag
DBGET
integrated database retrieval system
