Polyodon spathula (Mississippi paddlefish): 121322778
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Entry
121322778 CDS
T07273
Symbol
sp5a
Name
(RefSeq) transcription factor Sp5a
KO
K09195
transcription factor Sp5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121322778 (sp5a)
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
121322778 (sp5a)
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
Zap1_zf1
zf-C2H2_6
zf-C2H2_8
zf-Di19
FAD_binding_2
zf-C2H2_15
zf-H2C2_5
DUF7560
Zn_ribbon_19
Zn_ribbon_ISL3
Motif
Other DBs
NCBI-GeneID:
121322778
NCBI-ProteinID:
XP_041119004
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Position
11:12767793..12770434
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AA seq
378 aa
AA seq
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MAALAVMRNDTLHAFLQDRTPNSSPETTQHSPLALLAATCSRIGHHHGSGPAEFLPVSYD
PNLGSPSRIFHPWSTEGPCNPTAGLQNSSSLAMSPQKSQFTAHMQSSFGSHELPLTPPAD
PYPYDFSPVKMLPSSMQSLQSSCPPTYVPAVTYAAPAPIASAMSGFVQGHTGRLHQQPRQ
LSPNPGDDIPWWSLQQGNPVNHPSSLAPHRFPLHRSLVLGHSDFAQYQTQIAALLHTKSP
LATARRCRRCRCPNCQSSSSSDEPGKKKQHICHIPGCGKVYGKTSHLKAHLRWHSGERPF
VCNWLFCGKSFTRSDELQRHLRTHTGEKRFVCPECGKRFMRSDHLAKHVKTHQNKKSKVV
DKSTEHVKREEIRNNKQQ
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcagctttggctgtgatgaggaacgacactctacacgctttcctccaggatcgcacc
ccgaactcttcacctgaaacgacacaacattctccactggctcttttagctgccacttgc
agcaggattggacatcatcatggttcaggtcctgcagaatttctcccggtctcatatgac
ccaaatctcggatctccgtctagaatatttcatccttggagtaccgaaggaccatgcaac
cctacagcaggacttcaaaacagctcgagcttggcaatgtcccctcaaaaatctcaattc
acagcacacatgcagtcatcttttggttcccatgaactccccttaacgcctccagcggat
ccatacccctatgatttttcacctgtgaagatgctgccttcttccatgcagtcactacag
tcaagctgcccacccacatatgtaccagctgtgacctatgcagcaccagcacctattgcg
tctgcgatgtcaggttttgttcagggacacactggacgtcttcatcagcaacccaggcaa
ttgtctcccaacccgggggatgacattccctggtggagcctccagcagggtaacccagtt
aaccacccttcctcccttgccccacatcgcttccccctccacaggagcctagtcctgggg
cattcggactttgcacaatatcagactcaaatagcagccctgcttcacacaaaatctcca
cttgccacagccaggaggtgtcggagatgcagatgccccaactgccagtcgtccagttcc
agtgatgagcctggaaagaagaaacagcacatctgtcacataccggggtgtggaaaagta
tatggcaaaacttcccacttaaaagctcacttgaggtggcattctggagagagaccattt
gtgtgtaactggctgttttgtggcaaaagcttcaccaggtctgatgaacttcaaaggcac
ctcaggacacataccggggagaaacgctttgtctgccccgagtgtggcaaaaggttcatg
aggagcgatcacctggccaagcacgtaaaaactcaccagaacaaaaaaagcaaagtggta
gataagagcacggaacacgtaaaacgtgaagaaatacgaaacaataagcaacaatga
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