Polyodon spathula (Mississippi paddlefish): 121322780
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Entry
121322780 CDS
T07273
Name
(RefSeq) SLIT and NTRK-like protein 3
KO
K25834
SLIT and NTRK-like protein 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121322780
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_9
LRR_14
BOP1NT
Motif
Other DBs
NCBI-GeneID:
121322780
NCBI-ProteinID:
XP_041119009
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Position
11:32110568..32115566
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AA seq
870 aa
AA seq
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MLWITLLSTIALGWTTPIPLLEDSEEIDEPCFDPCYCEVKESIFHVHCDSKGFTNISQIS
QLWSRPFKLYLQRNSMRKLYFNSFSHLNNAVSINLGNNALQDIHAGAFNGLNILKRLYLH
ENKLEVFRNDTFKGLESLEYLQADYNIIKRIESGAFRNLSKLRVLILNDNLIPMLPNFLF
RSVSLTHLDLRGNRLKTLAYRGMLEYIGRSLMEIQLEENPWNCNCEIVQLKTWLERVPYT
ALVGEITCESPFHFHGKDLREIKRSELCPLLSESEIEASLGIPRLPFNNENAWPTKPSSM
LSSYHNTASSVEYKTSDKQPRPTKKPRLHRMPPTPRSVYPGPNQPPIAAYQTRPPIPIIC
PTGCTCNLHISDLGLTVNCKEKEFRNISELLPRPLNAKKLYLSGNLIQKIYRSDFWNFSS
LDLLHLGNNRISSVQDGAFINLPNLKSLYLNGNDIERLTPGMFRGLQTLRYLYFEYNVIR
EIKPAAFSLMPNLQLLFLNNNLLRTLPTDAFAGTSLARLSLRNNYFLYLPVSGVLEHLNS
IVQIDLQQNPWDCTCDIIPLKQWMEKLSPVIVVGEVVCKTPEFVFEKDLRSLEANLLCPE
LKYVAVSPALPDDMISTTDSGLGLSPTRGAIPLSVLILSLLILFISSVFIAAGLFAFVLR
RRKKLPFRTRQEVELTGIQMQCRIFEERQNASPEKTPGHVYDYIPHPVTEMCNNPIYKPR
EGEMEEQFVETKENNTNYRTLIEKEKEWAMAVSNSQLNTIVTINQSGDIAGFHENGVLCP
NVIDRERPSPTVGFVDCLYGTVPKLKDLHAHPPGMQYPDLQQETRLKETLLFNAGKGLPD
QTQSEYLELRAKLQTKPDYLEVLEKATYRF
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggataactctattaagcacaatagctctaggatggactacgccgatccccttg
ctggaggactcagaggaaatagatgagccgtgttttgacccctgttactgtgaagtaaaa
gaaagcattttccatgtacattgtgacagcaaaggatttacaaatatcagtcagatttca
cagttatggtcaaggccatttaaactttacctgcagaggaactccatgagaaagctgtat
tttaacagtttttctcatttgaacaacgctgtgtcgatcaacttgggtaacaatgcactg
caggacattcatgccggtgcgtttaatggcttgaacattttaaaaaggctgtatctccac
gaaaacaaactggaggtgttccgaaatgacactttcaaggggttagaaagtctggaatat
cttcaggcagattataacattattaaaagaatcgaaagtggagcatttaggaatttgagt
aaactaagggtactcatactgaatgataatttgatccctatgctaccaaactttttattc
aggtctgtgtctttaacacaccttgatttgagaggaaaccggttaaaaaccctcgcttac
aggggcatgttggaatacatcggcaggagccttatggagatccagctggaagaaaatcca
tggaactgtaactgcgagattgtccagctgaaaacgtggctggaacgtgtcccttacaca
gctctggttggggagattacatgcgagtcaccctttcactttcacggcaaagatttaagg
gaaattaaaagaagtgaattgtgtcctctgctgtctgaatccgagattgaagctagtctt
ggaataccacgtctgccatttaataatgagaatgcatggcctacaaaaccatcttccatg
ctgtcttcttaccataacacggcctcttcagttgaatataagacatctgacaaacagcca
agaccaacaaaaaaacccagactacatagaatgccaccaaccccccgcagtgtttaccca
gggccaaatcagcctcctatagctgcttaccagacaagaccgcctataccaatcatttgc
cccactgggtgtacctgtaatttacacattagcgatttaggattgacagttaattgcaaa
gaaaaggagtttcgtaatatatctgaactccttcccagaccactaaatgcaaagaaactg
tacttaagtggaaatttaatacagaaaatatacagatccgacttctggaacttttcaagc
ttggatttacttcatctgggtaataacaggatatcttctgttcaagatggggctttcatc
aatcttcccaatttaaaaagcctatacttaaacgggaatgacattgaaagactaacgcct
ggcatgtttagggggttacagacattgcgttacctgtactttgaatacaacgttataaga
gaaataaagcccgctgcatttagtttgatgcccaatcttcagctgctgtttctcaataac
aacctactcagaacactgccaaccgacgcttttgcaggcacttcacttgccaggctgagt
ctaagaaataactactttttgtatttgccagtgagtggagttcttgagcatctcaattcc
attgtacagattgatctgcaacagaacccctgggattgcacatgcgacataataccccta
aaacagtggatggaaaagcttagtcccgttatagtggtgggagaggtagtatgcaaaaca
ccagagtttgtgtttgagaaggatttgaggtctcttgaagccaatctgctgtgcccagaa
ttgaaatatgtcgcagtatcacctgctttgcctgatgatatgatctcaaccactgattct
gggctaggattgtctccaacaaggggcgccatccccctttctgttctcatactgagtctt
ctaatcctattcatctcctctgttttcattgccgctggactctttgcttttgtgttaagg
aggcgaaagaaactgcccttcaggacaagacaggaagtagaactgactggcattcaaatg
caatgcaggatattcgaagaaagacaaaatgcatctccggagaaaactcctggtcacgtg
tatgattacataccccatcccgtgacagaaatgtgtaacaaccccatatacaaacccaga
gaaggggaaatggaggagcaatttgtcgagactaaagaaaataatacaaactataggact
ttaatagagaaagagaaagagtgggcaatggcagtatccaattcccagcttaacactata
gttacaataaatcagtcgggggacatagcagggttccatgaaaatggtgttctgtgtccc
aatgttatagacagagaaaggccatcgccaacagtgggctttgtagactgcctttatggc
acagttcccaagctaaaggacttgcacgcacaccctcctggaatgcagtatcccgattta
cagcaagaaaccaggctgaaagaaacactccttttcaatgctggaaagggattacctgac
caaacccaaagcgaataccttgagttaagggccaaactccaaaccaagccagattacctc
gaagtcctggagaaagcaacatataggttctag
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