KEGG   Polyodon spathula (Mississippi paddlefish): 121322833
Entry
121322833         CDS       T07273                                 
Name
(RefSeq) telomere-associated protein RIF1-like isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pspa03032]
    121322833
DNA replication proteins [BR:pspa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    121322833
SSDB
Motif
Pfam: Rif1_N
Other DBs
NCBI-GeneID: 121322833
NCBI-ProteinID: XP_041119154
LinkDB
Position
11:complement(5329589..5350873)
AA seq 2307 aa
MMATVLSTSSSMLPLLETLEDSTVSLTEQTDAYLTIAKRLSGEDGRQFIPVVGKHFTRLC
KAFKEHISSQNSELCQAALQALGFTVFHSSIVSGLPVTYVEELILALSSLAVKSCDKNTC
TRALWVIAKQNFPAEAVGKKVPDILKTLETVHARQDVQSMVMEHEALNVVIRLLEQTPAQ
MGEGAVTWAKLVIPLVVHSAPKVRLRAAAALELGMPLLIEKQQEVAAITEALMSSKLIPE
LQKLFSSKNETNVLKLWPLFVRLLGKTLHRGGAFINSLLHLEELGFRSSSPVVKKIAFIA
WKSLIDNFALNPDILCSTKRLKLLMQPLATIQVRTEVLLLTKLEVWWYLAVKLGPHFTAN
FEQVGIPLVQSTMITGSTAISLGTPARTVANQSISAAQTTPKTGTNAFASPASTPRLGLN
SSMHASASYPSIQLLGLEMLLHFLLGPDITAAAAQSKLQLSLEPLANPLITSPSFFCKHA
GVLINSVRDGIITVGKEAPDATLNLIWKNLIGFVTAAAGNKKERQGSEVLTLFLQALHTI
VTSEALPAHRALILLEATVKGIPPKILGSPAYQVANMDVLNGTPALFLMLLFYHRSLLES
FVTEERFFVSVETLVACGLSGPTSPLAYSESILNVINQRATLVANKEHLWRMWSIVVNPL
TERITHTNEVNQGDALEHNFTAVHSALMLPITHILTVKGFPQGTMKPLLRSWAELYRVFA
RCAALVATAEENVCCEELCVKMTPVLGNGALSNLSTLEAVVHVLTVITECVNFSPYTPRF
QQIINSPHTPSSWMRKKNKPLGNLTSYMKLLVQVVDSFHTQGDAEPLADTPASSMVLVGA
SIINILSVLFSNLSLASAIGESLSSLTRPITTFFQRTAMPQADLPKVYAILGHKLEKLLG
DILTCLQSRYATTYGDELLEQLAPLLSVLFLHQNKQFRNQIAQFWNATFAKAATLNYPQE
LKPVLNQVKMKLSIILPGFVAVEVAVDESGGPYSDNSECSQLGTKLSGLEVKSAGKRDSL
LSRTDELKEKHSAPVAVKLDFGSPKPPRRELLLDEEKSVDFVFIPPELKQRVLTEHQKEV
LRTKRVDIPAMYNNLDASQDTTLFTQYSQSQEDSMDKPATDKMEEATNTPEATLEIQIPE
ERSEDQDEKMESEKAPDRAQPDMEIKNNEENNVGTKMETTESDSPDPVTENPEDLAETLK
APDVSKEEPPGVEDVAMETEDSSVNVSNSSASSDVVSGTPQKPSSRRQSFITLEKFTTLD
GNTFSPVTLNTFMESDSKALKSASQEAVAVEPKEAETPLEKSPDTAVDDTMPVPEKPKRG
RPKGRKSGSTPVVASKLEKSSEQSMEEKETEPKVEKNSIGHSDGAEEDCIPDTQPVKPDS
SECVNVEKPQENIMSAKEETVSSLESKENTPPGELENQDNEDQASQSQSSQNEPRRSSRR
FSQPSRSLDCSESQESEEKGKTKKRGPKTIEEKAIERKASLYHVGQAEHQKASSPTASQI
DTRLQGETSKRSNKAPGREDRVTRRNVSATAVETASPCEAEEGSKVASQGRSRYQTRRSS
QGLLSSIENSESDSSETRDDGQKTKKSGRGRKPNKVADSSDFKTESEPQKEQVVERAAVA
DQMETTPVVNAIEQAVAEDGNTVVLQVPETENTNETPTVLEPADVSGNFKSEQSVAFDQE
NKTYSLNRTLDTESCSEPMSKSMITEPTIGDLSTAHSDVFNASAASENLHVCSRSKRGRG
RRRSKVCNRCLVDSRQDEDAFGMQDSDKQVLDLKELSSGISSGGQQFDDSVFDPNAVSTP
LLSKDPVTFSTSVSQLALGNDLEEEKTTVLGTVILVEGVEQGTLVATTSELCVQTADAIK
ETQVEEQHVLETKKVQSETTEHPEQKTPTSEVEENQQLVPLEQWTEDKQPKPDQEKMLEE
TVEPPDEKHPNEMQGIEDDVLPAGVVASPPGLPEESWVCKQTDSETLNLDSPPKQKGCDV
ACLIEVGQSPSGTKPRGVWSPTASPSTSILKKGLKRPLEVDSPSPLNKNRRVSFANPIYR
QELADDIDRRSPVVRPSSNGSPRAKSHSASITQQKFVSTPTKGLLSLSPRNLNSPGFKSS
KKCLISEMSGELKPIPKDCVYPSLVGCSVPVEAILPQLTSSMWARGFGQLVRAKNVKTVG
DLSALTAAEIKALPIRSPKLLNVKKVLRTYHEQQRKLRGVDDLKGFDETEKMTSETEDKE
QVLNIEEEEEKLAAELVDTPVPAAVMKPPSDLPSDVEALNTRFSSEDLGKYSSSQLFTMH
QQMSGMLNDIVSNLHSRISSPSLVSLD
NT seq 6924 nt   +upstreamnt  +downstreamnt
atgatggctaccgttctctctacaagttctagcatgttgcctctcctggagaccctggag
gattccactgtatccctgactgagcagactgatgcctacctcactattgcaaagcgtctg
agtggggaggatggaagacagtttatccctgtagttggaaagcactttacacgtctctgt
aaagcttttaaggagcacatttcaagccagaattctgaactctgccaggcagcacttcaa
gcattgggcttcactgttttccacagcagcattgtgtctgggttaccagtaacttatgtg
gaagagctgattttggctctcagctcccttgctgttaaatcctgcgacaagaatacttgc
acccgggcactttgggtgattgctaaacagaacttcccagctgaagcagttgggaagaag
gtaccagacattctaaaaacgttagaaactgtacatgccaggcaagatgtgcagtcgatg
gtgatggagcacgaagcactaaatgttgttataaggctgttggagcagactccagctcag
atgggggagggtgcagtcacatgggctaagcttgtgattccattggtggtacactccgcc
cccaaggtgcgattacgggcagcagcagctctggagctagggatgccccttctgatcgag
aagcaacaggaggtggcagccatcacagaggccctcatgtcttcaaaactgataccagaa
ctacagaagctgttttcatccaagaatgagactaatgtgctgaaactgtggcccctgttt
gtgaggttactgggaaagaccctgcaccgcggaggagctttcattaactctctgttgcat
ttggaagagctgggtttccgcagcagttctccagtagtgaagaaaatcgccttcatcgcc
tggaaaagcttgattgataactttgcgttgaatccagatatcctttgtagtaccaagcgt
ctgaaattactgatgcagcctctcgccacaatccaagtgagaactgaagtcctgctgctg
actaaactggaggtctggtggtacttggcagtgaaacttgggccacatttcactgctaac
tttgaacaggtagggattcctctggtccaaagcacaatgatcacaggttctactgcaata
tctctgggaactcctgcaagaacagtggcaaaccagtccatcagcgctgctcagactacc
cccaaaactggcactaatgcttttgcaagccctgcttcgactcctcggctcggtctgaac
agtagtatgcatgcgtcagcatcgtacccgtccattcagctgctggggctggagatgctg
cttcactttctcctgggcccggacatcaccgctgcggccgcacagagcaagctccagctc
agtctggaaccacttgcaaatccactaatcaccagcccttcatttttctgcaagcatgct
ggagttctcataaactcagtccgagacgggatcattactgtaggcaaagaggctccagat
gccacacttaaccttatctggaagaatctaattggctttgtgaccgcagcagcaggcaat
aaaaaggagaggcagggctcggaggttttgaccctgttcttgcaagctttacacaccata
gtaacttcagaagcacttcctgcacaccgagcattgattctccttgaagccactgtgaag
ggaatccctcctaaaatattgggttctccagcttaccaggtagccaatatggatgtttta
aatggaactcctgcactgttcttgatgctcttgttctatcacagaagcttgttggagtcc
tttgtaactgaggagaggtttttcgtaagtgtggagacactagttgcctgtggtctgtct
ggtcccacgtctccgctggcatacagcgagtccattctgaacgttatcaaccagagggcc
accctggtggcgaacaaggagcacctttggagaatgtggagcattgtagttaacccttta
acagaaaggatcacgcatacaaatgaagtcaatcaaggagatgccttagaacataacttc
accgctgtgcacagtgctctgatgctgcccataactcacatcctcacagtaaagggattc
ccacaaggcacgatgaagcctctgctgcgctcctgggcagagctgtacagggtgtttgca
cgctgtgctgctctggtggctacagctgaagaaaacgtctgctgtgaggagctgtgtgtc
aaaatgacaccagtcctgggaaacggtgctctgtcgaatctgtcgacattggaagcagtt
gttcacgttctaactgtcattactgagtgcgtcaacttttcaccttacactcccaggttt
caacaaattataaattctccacatacaccatccagctggatgcgaaagaagaataagccc
ctgggaaacttgacctcttacatgaagctcctggtgcaggtggtggactcgttccacacg
cagggtgatgcagagcccctggcggacacacctgcttcttccatggttttagtgggggct
tccatcatcaacattctgtcagtgcttttcagcaacctgtcactggccagtgccatcgga
gaatccctttcaagcctcaccagacccataaccacgtttttccaaagaactgcaatgccc
caagctgatttgccaaaggtctatgcaattcttggacacaagctggaaaaactactggga
gacattctaacctgcttgcagtctcgctatgcgaccacctatggtgatgaactgttggaa
cagctggcgccgttgctgagtgttcttttccttcatcagaacaagcaattccggaaccag
atagctcagttttggaatgccacatttgcaaaggctgcaacattgaactacccacaggaa
ctcaagcctgttctgaaccaggtaaagatgaaactttccattatactgcctggttttgta
gctgttgaggtagctgttgatgagtccggtggaccttactctgataatagtgagtgttcc
cagttaggcacaaagctcagtggcttggaagtgaagtctgcaggaaaaagggattccttg
ctttccagaaccgacgaactaaaggaaaagcactctgcaccagtggcggtaaaactggac
tttggctctcccaagcctcctcgccgggaacttctgttggacgaggagaaatctgtggac
tttgtgtttatccccccagagcttaagcagagagtgctaactgaacaccagaaggaagtt
ctgaggacaaaaagggttgatattcctgccatgtataataacctggatgcttcccaagac
accaccctgtttacacagtacagccagagccaggaggactctatggataaaccagccaca
gataagatggaagaagccactaacacaccagaagccactttagaaatacaaatacctgaa
gagagatctgaggaccaagatgaaaagatggaatcggaaaaagcccctgacagggcacag
ccagacatggagataaaaaataacgaagaaaacaacgtgggtaccaaaatggaaactact
gagtccgattcacctgatcctgtaacggaaaaccctgaagaccttgctgagactttaaaa
gctccagatgtttcaaaggaggagccacctggggttgaggatgttgccatggagacggag
gacagcagtgtcaatgttagcaacagttctgcctcttcagatgtggtatctgggactccc
cagaaaccatctagtcggcggcagtcttttatcactttggagaagtttactactttagat
ggaaatacctttagtcctgttacgctcaacacattcatggagtcagatagcaaagcttta
aagtctgctagtcaggaagctgtggcggttgaaccaaaggaggctgaaacacccctggag
aaaagcccagacactgcagtagacgatacaatgccagtacccgaaaagcctaagcgtggg
cgtccgaaaggccgtaaaagtggcagcacacctgtagtggcatcaaaacttgagaaaagc
tcagaacagtcaatggaagagaaggaaacagagcctaaagtggaaaaaaacagtattggt
cacagtgacggagcagaagaggactgtatcccagatacacagccagtgaagcctgactcc
tctgagtgtgtgaatgtagagaaaccccaggaaaacattatgtctgcaaaggaggagact
gtttcatctcttgaatccaaggaaaatactcctcctggagaattggaaaaccaggacaac
gaagatcaagcttctcaaagtcaatctagccagaacgagcctaggcgttcctcaagaagg
tttagtcaaccatcgcgctctttggattgctcagaaagccaagagagcgaagagaaagga
aaaactaaaaagagaggcccaaaaaccatagaggaaaaagccattgaaagaaaagctagt
ctgtatcatgtgggccaagccgaacatcagaaggcatcttctccaactgcaagccagata
gacactcggttacagggggaaaccagtaagaggagcaataaagctccagggagagaggac
agggttaccagaagaaatgtctctgccactgcagtggagacagcatctccttgtgaggca
gaggaagggagtaaagtagcctcacaagggcgtagcaggtaccagactcggagatcttct
cagggcctgctttccagcatcgagaattctgagtctgatagctcagaaactcgtgatgat
ggtcagaagacgaaaaagagtggaagaggaaggaagcctaacaaagtggcagactcttca
gacttcaaaactgaaagcgaaccccaaaaagaacaagtggtggaaagggcagcagtagca
gatcaaatggaaactactcctgtggtaaatgccattgagcaagcagtggctgaggacggc
aatacagtggttttacaggttccagagaccgagaacacaaatgagacccctacagtcctc
gagcctgcggatgtgtctgggaattttaagagtgagcagagtgttgcttttgatcaggaa
aacaaaacctacagtttgaacagaactttagatacagagtcttgttcagagcccatgtcc
aagagtatgatcacagagcctactattggggacttatccacggcgcactcggatgtcttc
aatgcttctgcagcaagcgaaaatctgcatgtgtgttctcgcagcaagaggggacgtgga
cgcaggcgttccaaggtctgcaaccgctgtttggtggactctcggcaggatgaagacgcc
tttggcatgcaagattcagataagcaagtgttagacctgaaagagctttcatctggaata
tcctctgggggccagcagtttgacgacagtgttttcgaccccaatgctgtgagcactcca
ctgctctccaaggatcctgtgacctttagcacctctgtaagccagctggctttgggaaat
gacttggaagaggagaaaactactgttctcggaactgtgattttagtagagggggttgag
cagggcaccttagttgctaccaccagtgagctctgtgtgcaaacagcagatgccataaaa
gaaacgcaggttgaagagcagcatgttctggaaacaaaaaaggttcaatcagaaactaca
gaacacccagagcaaaaaactccaaccagtgaggtagaggagaaccagcagttggtgccc
cttgaacaatggactgaggataagcagcccaagccagatcaagagaagatgcttgaagaa
actgtggaaccaccagatgagaagcatcctaatgagatgcaagggatagaagatgatgtc
ttgcctgctggagtagttgcttctccacctggcctgcctgaagagtcttgggtgtgtaaa
caaacagattctgaaacattaaatttggactctccaccaaagcaaaagggttgtgatgtg
gcttgtctaattgaagtgggccagagccccagcggcacaaaaccccgtggtgtgtggtcc
cctactgcttccccttccacaagcatcctcaagaaagggttgaagagaccgctggaggtt
gactctccttcacctctcaacaagaaccgtcgagtgtccttcgccaacccaatctatcgg
caggaactggctgatgacattgatcgtcgtagcccagttgtaagaccatcttcaaatggc
tccccaagagccaaaagccatagcgcatcaattacacaacaaaagtttgtttccactcca
accaagggcttgctgagcctgagcccccgtaatctcaatagccctggattcaagagctcc
aagaaatgcttgatatcggaaatgagcggagaattgaagcctatccccaaggactgtgtg
tacccttctctagtgggttgttcagttcccgtggaggcgatcctgccgcagcttacttcc
agtatgtgggcgcggggatttggccagcttgttcgagccaagaatgtaaagacagttggt
gatctgagtgctctcactgctgcagagatcaaagccctccccattcgctctccaaaacta
ctcaatgtgaaaaaagtgcttagaacgtatcacgaacaacagaggaagttgcgtggtgtt
gacgacctcaaaggatttgatgaaacggagaaaatgacttctgaaactgaggacaaggag
caagtcctgaatattgaggaggaggaggagaagctagcagctgaattggttgatacgcct
gttccagctgcagttatgaagccaccttctgacctgccctctgacgtggaagctcttaac
acccggttcagctctgaagaccttgggaaatactccagcagccagctgttcacaatgcac
cagcagatgagcggcatgttgaacgatattgtgagcaatctgcactcccgcataagttct
ccatcgctggttagcttagactga

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