Polyodon spathula (Mississippi paddlefish): 121322895
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Entry
121322895 CDS
T07273
Name
(RefSeq) polyhomeotic-like protein 3 isoform X1
KO
K11458
polyhomeotic-like protein 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121322895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121322895
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
121322895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
zf-FCS_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
121322895
NCBI-ProteinID:
XP_041119381
LinkDB
All DBs
Position
11:39082630..39109311
Genome browser
AA seq
1005 aa
AA seq
DB search
MIIPARFKVHHSIHPQKLEMENETSTTTSATTTTSSTPSQTQAPQLSLYSSTTERQAVQV
IQQAIHQPPSMAAQYLQQMYAAQQQHLMLRTAALQQQHLSSSQFQSLAAVQQATLSGGRQ
SSSPTASVTQQSSVSQPSINLSTSPVAQLISRSQTSSVAGSGGGGALGQQSMLLGNSSPT
LTTSQAQMYLRAQMLILTPSATVAAVQPDIPVLSSTSSSQTTATQIQNLTLRPHQPSTIT
SPQSVPLKATTQGQPLAVAHPKMSLCPLKPNQQPEPLMEGNKKGENPTTEPKPTTLTRPP
GAHQLIAPAPYPLIKHQPLPVHAAQPQKGPTHQLIIQQQPPPSHQVQPIALQVFRQEAPS
PSLAIQTQVPPPTTISVQSQHCTSITATALPLTSSPGQSQPVQQQTVVVSPPPTQSPTSQ
SPTIVIQPQALIQSQPHALVSAPVQLGPAHSPILSTAQVIQPHLPSVTSPIAHIVPLPYT
TLISPSINFPPQPPHQQQPPPPQASLGPMSSPPPPLPQLSHTPPAQLQPLPLQSVQALAV
QSEILNPGQMLVSEEELPAAEALVQMPYQGLPPPQTVAVNLQVQHPTPMEAPGVYRVEGM
CEEMREDGEECLPGNRTPTPPALSPPAGHVGDCEESSTQDVSTGLPGPPCVNTSSNTSVI
RSSSDPSYINSSPPPPLPPPPPPPPPPPPPPLPPTLLPAVVTSPSKPVPENKLPQAIVKP
HILTHLIEGFVIQEGLEPFPVSRSSLLTEKKGKECEQQVMEPNSEEPQSMMETEEPEHST
DSDMDDIIAEGVMEETVTELLKCEFCRKMGYAHKFLRSKRFCSKSCAKRFNVSCTKRVSL
LKADKGVRWTRKPDGRRGRRPRGAEGGSREHFLRQLPATYPAIGGMQPARSQSPEEDTVP
VAMTTRLRRQSEQGRERELRVRHPSGSNESLPSVQSDPTQWTVNEVWAFIYALPGCQDIA
AEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALKICARINTLKEP
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgataattccagctcggttcaaggtacaccatagcattcatccacagaagctggaaatg
gaaaacgagacgagcactacaacctcagccaccaccacaacctccagcacaccctcccag
acccaggccccacagctgtctctctacagcagcaccaccgagaggcaggctgtccaggtg
atccagcaggccatccaccagccccccagcatggcagctcagtacctgcagcaaatgtac
gccgcgcagcagcaacacctgatgctccggacagctgcactgcagcagcagcacctcagc
agcagccagtttcagagcctagcagctgtacagcaggcgacgctgtcaggaggaaggcag
tcctcttcccccactgcgagtgtcacacagcaatcaagtgtctcacagccttcgatcaat
ctctccacgtctccagtggcgcagctgatcagccggagtcagacctccagcgtggcgggc
agcggcggggggggagccctcggacagcagtccatgctcctggggaacagctcccccacc
ctgaccaccagccaggctcaaatgtacctgcgcgctcagatgctcattctcactccctct
gccactgtagctgctgtccagccagatattcctgtactttcttctacatccagctcccag
actacagctacccagattcagaacttgaccctgcgtccacaccaacccagcaccatcact
tccccccaaagcgtgccccttaaagccaccacccaggggcagcctctggcagtggcccac
cccaagatgtccttgtgccccctaaagcccaaccagcagccggagcccctcatggaaggc
aacaagaagggggagaaccccaccaccgaacccaagcccaccaccctcacccgcccgccc
ggagcccaccagctcatagcaccagccccatatcctcttatcaaacatcagcccctccct
gttcacgctgctcaaccacagaaagggccaacccaccagctgatcatccaacagcagcca
ccaccctcccaccaagttcaaccaattgcactccaggtctttcgtcaagaggctccgtct
ccctccttggcaatccagacccaggttcctccccccactacaatctctgtccagtcacag
cactgcacttccatcacagccactgccctgcccctgacctcatcccctggccaatcacag
ccagtgcagcagcaaacagtcgtggtttcacctccgcctactcagtcccccaccagtcaa
tcgcctaccatagtgatccagccccaagcacttatccaatcacagcctcacgctctggtc
tctgctcctgtgcagttaggccccgcccactcccccattctaagcacagcccaggtaata
cagccccaccttccttctgtgacttccccgatagctcacattgtcccccttccttacacc
actcttatttcaccatccatcaacttccctccccagccaccacatcagcagcagcctcct
ccccctcaggcctccctgggccccatgtcctcaccgcctcctcctctaccccagctgtcc
cacactccccctgcccagctccagccactccccttgcaatcggttcaggccttggcagtg
cagtcggagatcctgaaccctgggcagatgcttgtgtcagaggaagagctgccggcagcc
gaggccttggtccaaatgccctaccaggggctgccccctccccagactgtagccgtgaac
ctgcaagtgcagcatcccacccccatggaggctccaggggtctaccgggtggaggggatg
tgtgaagagatgagagaagacggggaggagtgtctacctgggaacagaactccaacacct
cctgctctgtcaccccctgctggtcatgtcggggactgcgaggagagctccactcaagat
gtctcaacaggtctgcctggacctccgtgtgtgaacacctcaagcaacacctctgtgatc
agatcctcctcggacccctcctacatcaacagctccccccctcctcctcttcctcctccc
cctccccctcctcctcctcctcctcctcctcctctcccccctactctcctgcctgctgtg
gtcacaagccccagcaaacctgtcccagagaacaagcttccacaggcgattgtcaaacca
cacatcctcacccacctcatcgagggctttgtcatccaggaggggctcgagccattcccg
gtaagtcgttcttccctcttgactgagaagaaagggaaggagtgtgagcagcaggtgatg
gaacccaacagtgaggagccacagtccatgatggagaccgaagagccagaacactccaca
gacagtgacatggatgacatcatcgctgagggggtaatggaggaaactgtgacagagctg
ctgaaatgcgagttctgtaggaagatgggatatgcacacaaattcctgaggtcaaaacga
ttctgctccaagtcatgtgccaaaaggttcaatgttagttgcactaaaagagtcagccta
ttgaaagcagacaagggggtccgctggactcggaagccagatgggcgacgagggcgccga
cccagaggggcagagggggggtccagggagcactttctccgacagttgccagctacttat
cccgccataggtgggatgcaaccagctcgcagccagtcgcctgaagaagacacagttcct
gttgccatgacaacacggctgcggcgacagagtgaacaggggagggagcgggagctcaga
gtgagacacccgtcaggcagtaatgagagcctgccctctgtacagtccgatcccacgcag
tggacagtcaatgaagtctgggcctttatttatgctttaccaggctgccaggacattgct
gctgagttccgcgcccaggagattgacggccaggcgctgctgcttctcaaggaagatcac
ttgatgagtgccatgaatatcaagctgggcccagccctgaaaatctgcgcccgtatcaac
actctaaaggagccctaa
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