Polyodon spathula (Mississippi paddlefish): 121322900
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Entry
121322900 CDS
T07273
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein-like isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121322900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121322900
Membrane trafficking [BR:
pspa04131
]
Autophagy
Other autophagy associated proteins
Others
121322900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
CMD
Motif
Other DBs
NCBI-GeneID:
121322900
NCBI-ProteinID:
XP_041119398
LinkDB
All DBs
Position
11:27839267..27857973
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AA seq
1031 aa
AA seq
DB search
MSGFTKQTSTDCFQLGFPLAPGDRDVTTDEIETRRREHWKLLGSLKTTVEGLLSTNNPNV
WSKYGGLERLCKDMNNILSHGLLHDEVYCKQKDYWRFVWCVRYVSPQLAPHVNQFMNLEE
RSPRPGLQPSERHKAERWLHYSLQFHCLSAQLRPLLHQRSYTRKFYTDSAFLLSDPHVTA
MFQCLEAVEQNNPKLLALIDTAMLAHRKESPLLLMKSQSLLALPESVGVLPHNGVQRRYT
TSYSSQQAGQCSPLPSTVAGQFGSHMERSGVAQSWLCADRGIGTLPPALPNFSVSEPATP
AGSVLATHAPEDPYGELDDGPEYLAIGNLGRRCRVSHSSSTGSTESNGSMKGGPPAVTAP
SSLRSALLSLPPRRSSFSEGQGAERPDGARKSHARSHSDTGVTQARAPGGHRDITIIIED
PMAESLPEVPNVMEYGAFSTHSSEVSTPSSLCMESEGSQVSSVSDSMFRRPSEGQSLISY
LSEQDFGSCADLEKENAHFSISESLIAAIELMKCNLLKRGGLGSEGEGEEENDHEIQELK
QKIWLRRQQIRTSRLQPPPPHSHSAFTTTDSGGSQHSSQESLRHSDSGSIDEVKECALKD
ADIKRSLTCCSGKSLLSSESICHSFLQSNSAESVAMGLLRQFEGMQLPAASELDWLVPEH
EAPQKLLPIPDSLPISPDDGEHADIYKLRIRVRGNLEWAPPRPQIIFNIHPVPKRKVVVA
KQNYRCAGCGIRTDPDYIKRLRYCEYLGKYFCQCCHENSQSVVPSRILRKWDFSKYYLSN
FSRDLLAKIWGDPLFNVQDINSALYRKVKALEQVRLLRMQLVHIKNMFKTCRLAKELLEQ
FDQEPGHLTEDLHLYSLSDLSAVRKGELPPRLRELVRRGAAHVHSCMLCQAKGFICEFCG
NDKDILFPFELNKCRRCEECSACYHKNCFRSEDCPRCRRLAARREQLARRNMEQYEEDFK
TSHLLCRCGGLCLGAYKSGSAPAGSLWLCVRVGLLAWFCRGCGFGEIISKKVCMNVFLSR
VAFCSKKLCVL
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgagtggttttacaaagcagacgagcacggattgttttcagctggggttccctcttgcg
ccgggagacagggatgtaacgacagatgagatcgagaccaggaggagggagcactggaag
ctgctgggcagtctgaagaccaccgtggaggggctgctgtccaccaacaaccccaacgtg
tggtccaagtacggggggctggagcgactgtgcaaggacatgaacaacatcctgagccat
ggacttttgcacgacgaggtttactgcaagcagaaggactactggcgctttgtgtggtgc
gttcgctacgtcagcccgcagctggcaccgcacgtcaaccagttcatgaacctggaggag
aggagcccgaggcctggcctgcagcccagcgagcggcacaaggcagagcgctggcttcac
tacagcctgcagttccattgcctgtctgcacagctgcggcccctgctgcaccagcggagc
tacactcgcaaattctacacagactccgcattcctgctgagtgacccccatgtgacggcc
atgttccagtgtctggaggctgtggagcagaacaaccccaagctgctggctctgatcgac
acggccatgctggcccacaggaaggagtcccctctgctgctgatgaagagtcagagtctg
ctggccttaccagagtctgtgggcgtcctcccccacaacggggtgcagcgcagatacacc
acctcctacagcagccagcaagcaggacagtgcagccccctgcctagcacagtagccggt
cagtttgggagccacatggagcgctccggtgttgcccagtcttggctctgtgcagacaga
ggaatcggcacgctgccccctgcactgcccaacttctctgtcagcgagcccgccactcca
gcaggcagcgtcctggccactcacgcccctgaggacccctacggagagctagatgatggg
ccggagtacctggccattgggaacctgggtcggcgctgccgcgtctcccacagcagcagc
actgggagcactgagagcaatgggagcatgaaggggggccctccggctgtaaccgcaccc
tcatccctgagatctgccctcctcagcctgcccccccggcgctccagcttctctgaggga
cagggggcggagagaccggacggggccaggaaaagccacgcccgctcacactcggacaca
ggagtcacacaggcgcgggcaccaggaggacaccgggacatcactattataattgaggac
cccatggcagagtctctccccgaggtgcccaatgtgatggagtatggtgccttctccacg
cacagcagcgaggtcagcacgcccagctccctctgcatggagtccgagggctcccaggtc
agtagtgtgtcggacagcatgttccgcaggccttcggagggacagtctctcatcagctac
ctctctgagcaggacttcggcagctgtgctgatctggagaaggagaacgctcacttcagt
atctcagagtctctgattgcagcgattgagctgatgaagtgcaacttactgaagcgcggg
gggctgggctctgagggggagggggaggaggagaatgaccatgagatccaggagctcaaa
cagaagatctggctccgcaggcagcagatccgcaccagccgcctgcagcctcccccgccg
cactcccacagcgctttcaccactactgacagcggtggttcccagcacagctcccaggag
tccttgcggcactcagactccggttccattgacgaggtgaaggagtgcgctctcaaagac
gctgatattaagaggagcctgacctgctgcagtggcaagtccttgctcagctcggagtcc
atctgtcactcctttctgcaatcaaactctgccgagtcagtggcgatggggttgctgcgg
cagtttgaggggatgcaactccctgccgcctccgagctggactggcttgtccccgagcac
gaagccccacagaagctgctgccgatcccggactcgctgccgatctccccggatgacggc
gagcacgcagatatctacaagctgcggatccgtgttcgaggaaacctggaatgggctcct
cctcgaccacagatcatcttcaacatccaccccgtgcccaagaggaaggtagtggtggcc
aagcagaactaccgctgtgcaggctgtgggatccgcacagaccccgattacatcaagcgt
ctgcgctactgcgagtacctggggaagtacttctgccagtgctgccacgagaactcccag
tccgtggtgcccagccgaatcctgcgcaaatgggatttcagcaagtactacctgagcaac
ttctccagagacctgttggccaagatctggggtgaccccctcttcaacgtgcaggacatc
aacagcgccctctataggaaggtgaaagcgctggagcaagtgcggctcctgagaatgcag
ctggtccacataaagaacatgttcaagacctgccggttagctaaggagttgctggagcag
tttgaccaggaacctggtcacttgactgaggacctgcacctgtactctctgagtgacctg
agcgccgtgcgcaagggtgagctgcccccccgcttgcgagagctggtgcgccgaggggct
gcacacgtgcacagctgcatgctgtgccaggcaaagggcttcatctgcgagttctgtggg
aatgacaaggacatcctcttccctttcgagctcaataagtgccgccgctgcgaagagtgc
agtgcctgctatcacaaaaactgcttccgctcggaggactgtccgaggtgcaggcggctc
gctgcacgacgtgagcagttggccagacggaacatggagcagtatgaggaggattttaaa
acatcccacttgctgtgtcgctgtggggggctctgcttgggtgcgtacaagtctggatca
gcccccgctggctctttgtggctctgcgttcgtgttggactccttgcctggttctgcaga
gggtgtgggtttggagaaattatatcaaaaaaagtatgcatgaatgtatttctaagcagg
gttgcgttttgtagtaagaagctctgcgtgctctaa
DBGET
integrated database retrieval system
