Polyodon spathula (Mississippi paddlefish): 121322957
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Entry
121322957 CDS
T07273
Name
(RefSeq) WD repeat and FYVE domain-containing protein 1-like isoform X1
KO
K23299
WD repeat and FYVE domain-containing protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121322957
Membrane trafficking [BR:
pspa04131
]
Autophagy
Other autophagy associated proteins
Others
121322957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clat_adaptor_s
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
FYVE
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Lactonase
Motif
Other DBs
NCBI-GeneID:
121322957
NCBI-ProteinID:
XP_041119544
LinkDB
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Position
11:complement(30895336..30922194)
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AA seq
555 aa
AA seq
DB search
MAAEIHSRPQSSRPVLLNKIEGHQDAVNAAVLIPKEDGVITVGEDRTIRVWLKRDSGQYW
PSIYHTVSSPCSSMAYHHESKRIFIGQDNGAIAEFEISEDFNKITFVKTYPAHQSRVSAI
VYCPECEWVISTGHDKSVSWMCSRSGSLLGRHYFSSWASCLQFDHDTKHAFVGDYSGQIT
LLKLDQNTYSIITTLKGHEGSVGSLYWDPAQRLLFSGASDHSVIMWDIGGRKGRTLLLQG
HHDRVQSLCYLQLTRQLVSCAADGGITVWNMDISREEAPQWLESDCCQKCEQPFFWNLKQ
MWDSKTIGLRQHHCRKCGKAMCGKCSSKRSTYPVMGFEFQVRVCDACYETIKEEDRTSLA
TFHEGKHNIAHMNMDFSRGLMVTCGSDRVVKMHFMLLFSRQGKLRLQKWFIAVGEREKKK
IIREMTQSVLARQPKTCNFMDWKDLKIVYKRYASLYICCGMEDQDNELLTIEIMHRYVEL
LDAYFGNVCELDIIFNFEKAYFILDEFLMGGEVQETSKLSVSKCIEESDLMQEVSPGMKD
TLLKTMEEYMSKPAF
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgagattcactccaggccccagagctccagaccagttcttttaaacaagatc
gagggacaccaggacgctgtgaatgcggcggttttgatccctaaagaagatggggtgatc
actgtaggagaagatagaacaatacgagtatggctgaagagagacagcgggcagtactgg
cctagcatctaccacactgtatcctcaccttgttcatccatggcgtatcaccatgagagc
aaacgtattttcattggacaggacaacggagccatagcagaatttgaaatctctgaagac
tttaataagatcacattcgtcaaaacctacccagctcaccagagccgtgtttctgccatt
gtgtattgcccagagtgtgagtgggtaatcagcaccggccatgataagagtgtgagctgg
atgtgttccaggagtggcagcttgctggggagacactacttcagctcctgggcctcctgc
ttgcaattcgatcatgacacaaagcatgcctttgtaggagattactctgggcagatcacg
ttgctgaaactggaccagaacacctactccatcattaccacactgaagggacacgaaggc
agtgtaggatctctgtactgggaccctgcccagcggctgctgttctctggagcgtctgat
cacagtgttatcatgtgggacatcgggggacggaaaggaagaacactgctgcttcagggc
caccatgatagagtccagtccctgtgttatctgcagctcactcggcagctggtctcctgt
gctgccgatggagggatcacagtgtggaacatggacatcagcagagaagaggctccccag
tggctggagagtgactgctgtcagaagtgtgagcagccctttttctggaacctgaagcag
atgtgggacagtaaaaccatcggccttcgacagcatcactgcaggaagtgtggcaaagcc
atgtgtgggaagtgtagctcaaagcggtcgacctacccagtcatgggctttgagttccag
gtgcgcgtctgtgatgcctgctacgagaccatcaaagaggaggaccgtacctccctggcc
acgtttcatgaaggcaaacacaacatcgcccacatgaacatggacttttctagggggctc
atggtgacctgtggcagcgaccgggttgtaaagatgcacttcatgctgctgttcagccgg
cagggcaagctgaggctgcagaaatggttcattgccgttggagaaagggagaagaagaag
ataataagggagatgactcagagcgtgctggcaagacagccaaagacatgcaacttcatg
gactggaaagacttgaaaattgtttacaagagatacgctagcttgtatatttgctgtgga
atggaggatcaggacaatgagcttttgacaattgaaatcatgcatcgttacgttgaactc
ctggatgcgtattttgggaatgtatgcgaattggacatcatttttaatttcgaaaaggcc
tattttattcttgatgagtttctcatgggaggagaagttcaagagacatcaaagctgtcg
gtttcaaaatgcatagaggagtctgatctgatgcaagaggtgagtccagggatgaaagat
acattgctaaagacaatggaagaatacatgagtaaaccagctttttaa
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