Polyodon spathula (Mississippi paddlefish): 121322979
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Entry
121322979 CDS
T07273
Symbol
farp2
Name
(RefSeq) FERM, ARHGEF and pleckstrin domain-containing protein 2 isoform X1
KO
K06082
FERM, RhoGEF and pleckstrin domain protein 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121322979 (farp2)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
FERM_C
PH
FERM_M
FERM_N
FA
SOS1_NGEF_PH
IQ_SEC7_PH
PH_13
RHG20_PH
PH_20
PH_11
Motif
Other DBs
NCBI-GeneID:
121322979
NCBI-ProteinID:
XP_041119588
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All DBs
Position
11:complement(42448304..42534739)
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AA seq
1028 aa
AA seq
DB search
MGEIEGSYRPLQTPGTRLGVNSNVAVSTLEPGQSLYTAMPSSARNSKPRNMLQIRVEALD
ETQEVYEMESKSDGQELMTKVFQRFNLIENDYFGLEFQNLQMNWMWLEPIKPIVKQVRRP
KNTLLRLSVKFFPPDPGQLQEEYTRYLFALQMKRDLLEGKLTCSENTASLLASHLLQSEI
GDFDETADREHLKRNKLLPNQERLQEKIMEFHRRHMGQTPAESDFQVLEISRKLEMYGIR
FHSAADREGTKINLAVSHMGLQVFQGHTKINTFNWSKIRKLSFKRKRFLIKLHPEVHGPH
QDTLEFLMASRDQCKVFWKNCVEYHTFFRLMDQPEPKSKPILFSRGSSFRYSGRTQKQLV
DYVRDSGARRTPYQRRHSRARISTRILGADLPKQSLSYEGLKVPGSPSSATISFHSLHAS
STPPCPEPALPPTPLQEDPGKGTPQPLHSFQGISMDNPQLSPFALKSHLTLSPSFQMSTL
SLPGQVPSPLQSPVLSEVGTARLDEEEEGRKKRYPADKAYFIAKEILTTERTYLKDLEVI
TVWFRSAVIKENAMPEGLMTLLFSNIDPIYEFHRGFLKEIDQRLALWEGRSNAHVKGNYQ
RIGDVMLRNMCSLKEFTSYLQKHDEVLTELEKATKRLKKLETVYKDFELQKVCYLPLNTF
LLKPIQRLMHYKLILERLCKHYTPDHQDYSDCKDALKEVAEMAAQLQSSLIRLENFQKLT
ELQRDLIGIESLTASGREFIREGCLFKLTKKGLQQRMFFLFSDMLLYTSKGVTASNQFKV
HGQLPLHGMIIEENENELSVPHCFTIYSAQRTIVVAASSKVEMGKWIEDLNLAIEMAKMS
QEVSNLFLDNSVCDQSNRSSDEVSLEQESEDDTHSSHSSLDKQTHHRANTTMHVCWHRNT
SVSMSDHSLAVENQLSGYLLRKFKNSNGWQKLWVVFTNFCLFFYKTHQDDFPLASLPLLG
YTVSTPAEADSIHKDYVFKLQFKSHVYYFRAESEYTFERWMEVIKSAASATGRMSLLIPK
KTKEMNGN
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagattgagggctcctaccgtcccctgcagaccccaggaacacgacttggggtc
aattccaatgtggcagtcagtaccctagagcctggccaaagtctgtacactgctatgccc
agctctgccaggaactcaaaacccaggaatatgctacagatcagagtggaggcgctggat
gaaactcaggaggtctatgagatggagtccaagtctgatggccaggagttgatgacgaag
gtgtttcaacggttcaatctgattgaaaatgattactttggcctggaattccaaaacctg
cagatgaactggatgtggctggaaccaataaaacccattgtaaaacaagtgcgaaggcct
aagaacacactcttgaggctttcagtgaagtttttcccacctgatcctggccagcttcag
gaggagtacacaagatacctgtttgccctgcagatgaagagagatctgctggagggcaaa
ttgacctgcagtgagaacacggcttccctccttgcctcccatctgctgcagtctgagatt
ggagactttgacgaaactgcagacagagagcacctaaaacggaacaaactgcttccaaac
caggagagactgcaggagaagatcatggaattccaccggagacacatggggcagacacca
gcagagtcagatttccaggtgctagagatatcccgcaagcttgaaatgtatggaattcgc
tttcattctgctgcagaccgcgaaggaaccaaaattaacctggcagtttcccatatgggt
ctccaggtcttccagggtcacaccaagataaacacgttcaactggtccaagattcgtaag
ctgagcttcaagaggaagaggtttctgatcaagctgcaccctgaggtccatggacctcac
caggacactctagaattcctcatggcgagtcgcgatcagtgcaaggtgttctggaagaat
tgcgttgaataccacactttcttccgcctgatggaccagccagaacccaagtcaaaaccc
attctcttcagtagaggctcatctttcagatacagcgggagaacacagaagcagctggtg
gactatgtgagagacagtggtgctcgaagaacgccgtaccagaggagacacagcagagct
cgaatctctactcgcattttgggtgcagacttgccaaaacagagtctgtcatacgagggt
ctgaaggtcccaggttccccatcttccgccactatctccttccactccctgcatgcctcc
agcacaccaccctgccctgagcctgccctaccacccacccccctacaagaggaccctggg
aagggcaccccccagcctctgcactccttccaagggatatcgatggacaaccctcagctc
tctccctttgccctgaagagccatttgaccctgtctccctccttccagatgtcaacgctc
agcctgccaggccaggtgccttcacccctgcagagccccgtcctgagtgaagtgggcact
gccaggctggatgaggaggaggagggcaggaagaagaggtatccggcagacaaagcctac
ttcattgccaaagagattctgacaacggagagaacttacctgaaggatttggaggttatc
acagtgtggttccgcagtgcagtgataaaggaaaacgccatgcctgaaggcctgatgacc
ttgctgttctccaacattgaccccatttacgaatttcaccgtggattcttgaaagagatt
gaccagaggctggcactctgggagggacgctccaatgctcatgtgaaggggaattaccag
aggattggtgatgtgatgctgaggaacatgtgctctctcaaggagtttaccagctacctg
cagaagcatgatgaggtgctgacagagctagagaaggccaccaagcggctgaagaagctg
gagactgtgtacaaagactttgagctgcagaaggtctgctacctgcccctcaacaccttc
cttctgaagcccatccagagactcatgcactacaagctcatcctggagagactgtgcaag
cactacactcccgaccaccaggactacagtgactgcaaagatgccctgaaggaggtggca
gagatggctgcccagctgcagagcagcctgatccggctggagaatttccagaagctcaca
gagctgcagagagacttgattgggatcgagagcctcaccgcctctggcagggagtttatc
cgggagggctgtctttttaaactgacgaaaaaggggctgcagcagagaatgttcttcctg
ttttcagacatgctcctgtacacgagtaagggtgtcacagccagcaaccagtttaaagtg
catgggcagcttcctctacacggcatgattattgaggagaatgagaacgagttgtctgtc
cctcactgttttaccatctactctgcccaaaggacaatcgttgtagctgcaagttccaag
gtggagatggggaagtggattgaagacctgaatctggcaatcgagatggcaaagatgtcc
caagaggtgtcgaatttgtttctggacaacagtgtctgcgatcaatccaacaggtcctca
gatgaggtgtctttagagcaagagtctgaagatgacactcactcctcccacagctccttg
gacaagcagacgcaccaccgtgccaacaccactatgcatgtgtgctggcaccgcaacacc
agtgtgtccatgtctgaccacagcctggccgtggagaaccagctctccggatacctgctg
agaaaatttaaaaacagcaatggctggcagaaactgtgggtcgtcttcaccaacttctgt
ctcttcttctacaaaacacaccaggatgacttcccgttggcaagtctcccgttactaggt
tatacagtcagcaccccggctgaggcagacagcattcacaaagattacgtcttcaaactg
cagttcaaatcgcacgtgtactacttcagagctgagagtgaatacacctttgaaaggtgg
atggaggtgattaagagtgctgccagcgccaccgggagaatgagccttctgataccaaag
aaaaccaaggaaatgaacgggaactga
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