Polyodon spathula (Mississippi paddlefish): 121322988
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Entry
121322988 CDS
T07273
Name
(RefSeq) fibrinogen alpha chain-like
KO
K03903
fibrinogen alpha chain
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121322988
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121322988
00536 Glycosaminoglycan binding proteins [BR:
pspa00536
]
121322988
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121322988
Glycosaminoglycan binding proteins [BR:
pspa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121322988
Hyaluronan
Extracellular matrix or blood plasma proteins
121322988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
121322988
NCBI-ProteinID:
XP_041119616
LinkDB
All DBs
Position
1:80845133..80850593
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AA seq
762 aa
AA seq
DB search
MRRLHILCCLLAVFSTAWSQKVAFGDIAQGRGPRPVEQGYKSECATEKEWAACTDDDWGL
KCPSGCRIQGLLSQADRDIAGRIDRIRTFLEENRNRYKSTDQFTKQTYDYIREQLISDSG
NDNKYVNLADQLRRRIVDLKLKIENHLRILTILKDKIREQVDTMQALEVDIDIKIRACKG
SCASAFVYNVNTESYVTLEKQISQIEKFNLQRVENANSLRIVMTRPLRGDIDTPSSVYKS
SLVTEGGEKSIFGDVQQLRLSLQTADYEIKSGSAELSVTPAVGSGGVSIGSSSGDRVNAK
ETSTTGKSTSDSSITTHTKVVKCTKTVKKSIDYTKDGPVETVEMTGGSSECDHLESLGTD
DAVHSSVKEGKGDSGSFTMKVSGTSVPELHSLVNKHSSSSTSTKEVRGSGGSSVVTTSTR
ELPDHSRVKTVVQSGLGRGDGDFESEFGEGDFRAFHTETVFPGGSKMLDGKGSSSYSKTT
DYRMPSSILGSIGDDFMHNEDDDDVPDFHARSLKKEAVELVKGYVGKDCEDIRQKHVSGH
TSGLYQIKPDGLEVAVTVYCDQDTVLGGWVLVQQRMDGSVNFNRTWEEYKMGFGSTNEQG
QGELWLGNKYIHLLTQKESILRVELEDWEGHSTDAEYLVEVGPESEGYRLKVSKYSGDAG
DALIKGEPGLGPFLSHVDMKFSTYDKDNDNFEDNCAEMYGGGWWYNNCQAANLNGVYYTG
GQYDPHSKVPYEIENGVVWGTFKPQDYSLKIVKMKIRPMETH
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggttgcacatcctctgctgtttgctagctgtcttctctacagcatggtcacag
aaagttgcttttggggacattgcccaaggaagaggacccaggcctgtagaacagggatac
aaaagtgagtgtgcaactgaaaaagaatgggctgcttgtacagatgatgactggggcctc
aaatgtccatctggctgcagaatacaagggcttctaagccaggcagatagggatattgct
ggaagaattgacagaattcgaacatttctagaggaaaacaggaacaggtacaaatctact
gaccagttcaccaaacaaacctacgattacataagggaacaactcatctccgattcagga
aacgataataagtatgttaatctggccgatcaattacgtagaagaattgttgatctgaag
ctaaaaattgaaaaccacctaagaatacttacaatattaaaggacaaaatcagagaacaa
gttgatacaatgcaagcacttgaggtggacattgacatcaagatccgagcttgcaaaggc
tcatgtgcaagtgcttttgtttacaatgtcaacacagagagctatgtaaccttggaaaaa
cagatatctcagatagaaaaattcaatttgcagagagttgaaaatgctaactccctgaga
atagtcatgacaagacccttaaggggggatatagatacaccatccagtgtatataagtcc
tcactggttactgaaggtggagagaaaagcatattcggagacgtacagcaactccgactg
tccctacaaacagcagactatgagatcaaatccggttcagctgagctctcggtcactcca
gcagttgggtcaggtggtgtttcaattggctcttcatctggtgacagagtcaatgccaaa
gaaaccagtaccactggaaaatcaacctcagattcatctattactacacacactaaggtg
gttaaatgcaccaaaacagtcaaaaagagtattgattacacaaaagatggtccagtggag
accgttgaaatgacaggtggctcctcagaatgtgatcatttagaaagcttgggcactgat
gatgctgtgcattcatctgtcaaagagggaaaaggtgacagtggtagctttacaatgaag
gtgtctggtacctcagtacctgagttacattctctcgtcaataaacactcaagttcctcc
acgagtactaaagaggttcgtggcagtggcggctcttctgtagtaaccacctccaccaga
gagcttcctgatcactcaagagttaaaacagttgtgcagtctggtttgggcagaggtgat
ggggatttcgaaagcgaatttggggaaggggactttcgtgctttccatacagaaacggtt
ttcccaggtggcagcaaaatgttagacgggaaaggttcctcatcatattcgaagaccact
gactacaggatgcctagcagtatcttgggctcaataggtgatgactttatgcataatgag
gatgacgatgatgttccagacttccatgcccgcagcctgaagaaagaagcagtggaactt
gtgaaaggttatgtcggaaaagattgtgaggacatccgtcagaaacatgtctctggtcac
acaagtggcctgtaccaaatcaagccagatggattagaggtagcagtgacagtctactgt
gatcaagatacagtgttgggtggctgggtcctggtccaacagagaatggatggatccgtc
aactttaacagaacctgggaggaatacaagatgggctttggcagtaccaatgaacagggg
caaggggagctctggttgggaaataagtacatccaccttctgacccagaaggagagcatc
cttagagtagagctagaggactgggaaggccatagtactgatgctgagtaccttgtagag
gtgggccctgaatcagagggctacaggttgaaggtctctaaatattcaggtgatgcaggt
gatgctcttattaagggggagccaggccttgggccatttttgtcccatgtggatatgaag
ttcagcacttatgataaagacaatgacaactttgaggataactgtgctgagatgtatggg
ggtggatggtggtacaataactgccaagcagccaatctaaatggtgtatattacactggg
ggacagtatgacccccacagtaaagttccttacgagattgaaaatggagtggtctggggg
actttcaagcctcaagactactcacttaaaattgtcaaaatgaaaataagacccatggaa
acccattaa
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