Polyodon spathula (Mississippi paddlefish): 121323023
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Entry
121323023 CDS
T07273
Symbol
lss
Name
(RefSeq) lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00100
Steroid biosynthesis
pspa01100
Metabolic pathways
Module
pspa_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
121323023 (lss)
Enzymes [BR:
pspa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
121323023 (lss)
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Motif
Other DBs
NCBI-GeneID:
121323023
NCBI-ProteinID:
XP_041119674
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All DBs
Position
11:26605641..26652043
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AA seq
735 aa
AA seq
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MREGTCLRRRGGPYKSDPATDLTRWRIANVAGRQTWHYVEDGETAERAQSMLEAHSLGLD
TSKFINSLPKPITAQEAALNGMQFYSLLQAEDGHWAGDYGGPLFLLPGLLITCHIAKIPF
PEAWQKEMVRYLRSVQLPDGGWGLHIEDKSTVFGTALSYTTMRILGVGPDDPDLLRARNN
LHSKGGAVGIPSWGKFWLAILNVYSWEGMNTLLPEMWLFPSWMPAHPSTLWCHCRQVYLP
MSYCYAVRLTADEDELVRSLRQELYVQDYSTIDWPAQRNNVAACDIYTPHSKLLTTAYVM
LNLYESYHSSALRKWAIEELYDHIKADDRFTNCISIGPISKTINMLVRWYADGPTSSVFK
EHVSRIPDYLWLGLDGMKMQGTNGSQLWDTAFAVQAFLEAGAQDRCTFTQCLKQAHEFFR
ITQIPENPPNFEKYYRQMNKGGFPFSNLHCGWIVADCTAEGLKTVMLLQEKCTFIKDHIP
KQRLFDAVNVLLSMRNPDGGFATYETKRGGRLLELLNPSEVFGDIMIDYTYVECTSAVMQ
ALKHFHEEFPDHRTEEVRSTLQKGLEYCRKVQRTDGSWEGSWGVCFTYGAWFGLEAFACM
GHIYQNGSACWEVQQACQFLLSHQMQDGGWGEDFESCEQRRYVQSEKSQIHNTCWALLGL
MAVRYPDVGVIERGIQMLVNRQQSNGDWPQENIAGVFNKSCAISYTSYRNVFPIWTLGRF
GRCYPTSPLAGKLKM
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaggaacatgtttaaggagaagaggtggcccctataaaagtgaccctgccact
gacctgacacgctggaggatcgctaatgtggcggggagacagacctggcactatgtggaa
gacggggagactgcagaaagagcacagagcatgctggaagcacactccttgggacttgat
acaagcaagttcattaacagtttgcctaaacccatcactgcccaagaagccgctctaaat
ggaatgcagttttacagcctcctgcaagctgaggatgggcactgggcaggagactacgga
ggacccctcttcttactgccaggtctcctgattacctgccacattgctaagatccctttc
ccagaagcatggcagaaagagatggtgcgatacttgcgctccgtgcagcttccagacggg
ggctggggtctgcatattgaagataagtccacagtgtttggaacagccttgagctacacc
accatgaggatcctaggagttggacctgatgatcctgacctgctgcgagccagaaacaac
cttcacagcaaaggaggagctgttggaattccttcttggggaaaattttggttggccatc
ctgaatgtgtacagctgggaagggatgaatacgcttctcccagaaatgtggcttttccct
tcctggatgccagcacacccctctactctgtggtgtcactgccgccaggtctacctcccg
atgagttactgctacgctgtgcgcctgactgcagatgaagatgagctggtccgaagcctc
agacaggagctgtatgtgcaggattattccaccattgactggccagctcaaaggaacaat
gtggctgcatgtgacatttatacccctcatagcaaattactcacaacagcatatgtcatg
ctcaatttgtacgagtcgtaccacagcagtgctctgaggaagtgggctattgaggagctg
tatgatcacatcaaggccgatgacagattcaccaattgcatcagcattggaccgatctcc
aaaaccatcaacatgttggtgcgctggtatgcagatggacccacttcgtctgtttttaag
gagcatgtgtccagaatcccggactatctctggctcggccttgatggaatgaagatgcag
ggcactaatggatctcagctttgggatactgcatttgctgtccaagcatttcttgaggca
ggtgcgcaggacagatgcacatttacacagtgtcttaaacaggctcacgaattcttcaga
atcacacagataccagaaaacccaccaaactttgaaaagtactaccgccaaatgaacaag
ggagggtttcccttcagcaatctccactgtggctggattgttgctgactgtacagctgaa
ggcttgaagacagtgatgctgcttcaagagaagtgcacctttatcaaggaccacattccc
aaacagcgcctcttcgatgctgtcaatgtgctactcagcatgcggaatcctgatggtgga
tttgccacctatgagacaaagcgtggaggcaggctgctggagctcctcaatccctctgaa
gtgtttggtgatatcatgattgactacacttatgttgagtgcacctccgcagtgatgcag
gcactgaagcactttcatgaggaatttcctgaccacaggactgaggaggtcaggagtaca
ttgcagaagggtttagagtactgcaggaaggtgcagaggactgatggatcatgggaaggg
agctggggagtgtgctttacatatggagcttggtttggtttggaagcctttgcctgcatg
ggccacatctatcagaatggctctgcatgctgggaggtgcagcaggcatgtcagttcctg
ctgtctcatcagatgcaggacggaggctggggggaggactttgaatcctgtgagcagcgc
agatatgtccagagtgagaagtcgcagatacacaacacctgctgggctctgctggggctc
atggctgtaaggtaccccgatgttggtgtgatcgagcgagggatacagatgcttgttaac
agacagcagtctaatggagactggccacaggaaaacattgctggtgtttttaacaaaagt
tgtgctatcagctacacgtcgtaccgcaacgtgtttccaatatggacgctaggacggttt
ggacgctgctaccccactagcccattggcaggaaaactgaaaatgtga
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