Polyodon spathula (Mississippi paddlefish): 121323041
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Entry
121323041 CDS
T07273
Symbol
eif4a2
Name
(RefSeq) eukaryotic initiation factor 4A-II
KO
K03257
translation initiation factor 4A
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121323041 (eif4a2)
03012 Translation factors [BR:
pspa03012
]
121323041 (eif4a2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121323041 (eif4a2)
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121323041 (eif4a2)
mRNA cycle factors
Stress granule specific factors
121323041 (eif4a2)
Translation factors [BR:
pspa03012
]
Eukaryotic type
Initiation factors
eIF-4
121323041 (eif4a2)
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121323041 (eif4a2)
Exosomal proteins of bladder cancer cells
121323041 (eif4a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
Flavi_DEAD
UvrD-helicase
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
121323041
NCBI-ProteinID:
XP_041119694
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All DBs
Position
11:36878908..36886375
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AA seq
411 aa
AA seq
DB search
MSSSSADYNSSRDRDHGGPEGMEPDGVIESNWNEIVDNFDDMNLKETLLRGIYAYGFEKP
SAIQQRAIMPCIKGYDVIAQAQSGTGKTATFAISILQQLEIDQKETQALVLAPTRELAQQ
IQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKW
IKMFVLDEADEMLSRGFKDQIYEIFQKLSTNIQVVLLSATMPADVLEVTKKFMRDPIRIL
VKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHAR
DFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNREN
YIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtagttctgcggattataacagctctagagacagagaccatgggggccctgaa
ggaatggaacccgatggtgtcattgagagcaattggaacgaaattgtggacaattttgat
gatatgaacttaaaggaaacattacttcgaggtatttacgcctatggttttgaaaagcca
tctgccattcaacagagagctatcatgccatgcattaaaggctatgatgtcattgctcag
gcgcagtcaggaactggcaagacagccacatttgcaatatctatccttcagcagctggag
attgaccagaaggagactcaggctctggttttggctccaaccagagagctggctcaacag
atccagaaagtaatcctggctctgggtgactacatgggtgccacgtgtcatgcctgcatt
ggaggcactaatgtccgcaatgagatgcagaagctgcaggcggaggctccccacattgtt
gttggaacacctggacgagtgtttgacatgctgaacaggagatacctgtctcctaaatgg
ataaagatgtttgtgctggatgaagctgatgaaatgctgagtagaggatttaaggatcaa
atctatgaaatcttccagaaactgagcacaaacattcaggttgtgcttctgtcagctaca
atgccagctgatgtgttggaggtgaccaagaagtttatgcgtgacccaatccgtattcta
gtgaaaaaggaagagcttaccctagagggtatcaagcagttctacataaatgtagagaga
gaggaatggaagttggatacgctgtgtgacttgtatgagactcttactatcactcaagct
gtcattttcttgaacacaagaaggaaggttgactggctgacagaaaagatgcatgcaaga
gacttcacagtctctgctctgcatggagatatggaccagaaggaaagggatgttatcatg
agagaatttaggtccggatctagtcgtgtcctgatcacaactgacttgttggctcgtggt
attgatgtgcaacaagtctctctagttattaactatgacctgcccacaaacagagagaac
tacatacacagaattggtcggggtggccgttttggcagaaaaggagttgccattaacttt
gttactgaagaggacaagagaattcttcgagatattgagacattctacaatactactgtt
gaggagatgcccatgaacgtggctgatctgatctaa
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