Polyodon spathula (Mississippi paddlefish): 121323080
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Entry
121323080 CDS
T07273
Name
(RefSeq) oxysterol-binding protein-related protein 6-like isoform X1
KO
K20463
oxysterol-binding protein-related protein 3/6/7
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
121323080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121323080
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Oxysterol-binding proteins
121323080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Oxysterol_BP
PH_8
PH
CEP89
Motif
Other DBs
NCBI-GeneID:
121323080
NCBI-ProteinID:
XP_041119753
LinkDB
All DBs
Position
11:14207575..14252842
Genome browser
AA seq
920 aa
AA seq
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MANQQRGHHLRTMSSEEKTLTPVHKASTPTHKSGSSTSSHRDSRQESDSWEIIEGLKIGQ
TNVQKPEKHEGFMLKKRKWPLKGWHKRFFVLDNGILKYAKSPIDIQKGKLHGSIDIGLSV
MSIKKKARRIDLDTEEHIYHLKVKSQEVFDSWVSKLRHHRLYRQNEIVRSPRDASFHIFP
SPNAESATNAAGSEGKPKTSPWQPSIPSTGSLPASYSNGQSKVAAWLQESEEMDRCAEEL
ANCQSGLVELSRLLQNLEILQRTQSAPNFTDMQANCVDITKKDKRLSRRWRTKSVSKDTK
MQLQVFGCSLRHLKAVKIPLSASMAPVRLHSSNPNLCADLVDFQPPVSRLADTLECATDY
IKLQEDFCLIAQKVHSLLKSAFNTVAIEKEKIKQLISEQEQAGHTAQIVTLKRSLSQALT
QNAELRTRLHRIHSESVLSEKVVSVNIIPSTDEPNEQIHDSLPLTQQASNESRLSMSESV
SEFFDAQEVLLSASSSENEGSDDESYVSDVSDNFSEDNASVADNRQIPNGDLAGGGFRNG
RRTCLPAPSPDTSNINLWNILRNNIGKDLSKVSMPVELNEPLNTLQHLCEELEYTELLDK
AAETEDPFERMILVAAFAVSGYSSTYYRAGSKPFNPVLGETYECIREDKGLCFFAEQVSH
HPPISACHCESKKFTFWQDIRWKNKFWGKSMEILPIGIVNVALPKYGDHYEWNKVTTCIH
NILSGRRWIEHYGEITIRNTKSSLCICKLTFVKGNYWSSSVNEVQGFVMDQEGKVVHQLF
GKWHEGLYCGVAPSAKCIWRPGSMPTDYEMYYGFTRFAIELNELCPTIKDLIPPTDARFR
PDQRFLEEGNVEAAINEKQRIEDLQRSRRRYIEENNIKYQPRFFKKVIDANQREKWVTNN
TYWELRKVPGFSKLENPQLW
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcaacaacgtggccaccatctcagaaccatgagttcagaggagaaaacattg
acccctgtccacaaagcatcaacgccaacacataaaagtggctcttctacttcttcccac
agagacagccggcaggagagcgacagctgggagatcattgagggcctgaagatcgggcaa
acaaatgtccagaagccagaaaaacatgaaggcttcatgctgaagaagcgaaagtggccc
ttaaaaggctggcataagaggttttttgtgttggataatggaatcttgaagtacgccaag
tctcccattgatattcagaaaggcaaactgcatggaagtattgacattggtttgtcagtg
atgtcaataaaaaagaaggctcggagaattgacctcgacacggaagaacacatctatcat
ttgaaggtcaaatcccaagaagtttttgattcatgggtgtcaaagctccgacaccaccgc
ttgtaccggcagaatgaaattgtgcgatcgcccagagatgcctcgtttcacatctttcct
tcacctaatgcagaatcggcaactaatgcagctggatccgaaggaaagccgaaaacttca
ccttggcagccctccattcccagcaccggtagcttacctgcatcatacagcaatggacaa
agcaaagtggctgcttggctgcaagaatctgaagagatggacaggtgtgcagaagagctt
gcaaactgtcagtcaggccttgtggaactgagcagactattacaaaatcttgaaattctg
cagaggacgcagtctgcacccaacttcactgacatgcaggctaattgtgtagatataaca
aagaaagacaagcgactgagcagaagatggagaacaaaaagtgtcagcaaagatacaaaa
atgcaacttcaggtttttggttgttcattgcgacacttgaaagctgtaaaaattcctttg
agcgcttcaatggccccagtccgtttgcactcatccaatcccaacctctgtgcagatcta
gtggattttcaacctcctgtgagcaggctcgctgacacgctggagtgtgccacagactac
atcaagctgcaggaggacttctgtttaattgcacagaaagtccattctctgctgaagtct
gccttcaatactgtagcaatagagaaggagaagataaagcagctcatctctgagcaggag
caggcgggccacactgcccagattgtgacgctgaagaggtctttatcacaggctctgact
cagaatgctgaactgaggactcgtcttcaccgaatacactcagaatcggtcctgtccgag
aaggttgtcagtgtaaatatcatccccagcactgacgagcccaatgaacagatccacgac
agcctcccactgacacagcaagcctccaacgagagcagactgtccatgtcagaatccgtt
tcagaattctttgatgcccaggaagtgctgctgtcagcaagctcatcagagaatgaggga
tcagatgatgaatcatatgtcagtgacgtcagtgacaacttttcagaggacaatgccagt
gttgcagataacaggcaaataccaaatggtgacctagctggtggtggattccgcaacggc
cgtcgcacatgcctccctgccccctctccagataccagcaacataaacctgtggaacatc
ctgagaaacaacattggcaaggacctctccaaggtgtccatgccagtggagctaaatgag
cctctcaacaccctccagcacctctgtgaggagctggaatacacagagctgctggacaag
gctgctgagaccgaggatccgtttgagcgcatgatccttgttgctgcttttgcagtttcc
ggatattcttcaacatactacagagcaggcagtaagccttttaacccggttcttggagag
acctatgaatgtataagggaagataagggtttgtgcttttttgcagagcaggttagccac
catccacccatatcagcgtgtcactgtgaatccaagaaatttactttctggcaagatatc
agatggaaaaataaattctgggggaaatccatggaaatactccccataggaatcgtgaat
gtcgcacttccaaagtacggcgatcactatgaatggaacaaagtcactacctgcatacac
aacatcctcagtggtagaaggtggatagaacattatggagaaataacaataagaaatacg
aaaagcagcctgtgtatttgtaaactcacattcgttaagggaaactactggagttcaagt
gtgaatgaagtccaaggttttgtgatggaccaggaagggaaggtggtgcatcagctgttt
gggaagtggcatgaagggctgtactgtggcgttgcaccttctgcgaaatgtatatggagg
ccaggctccatgccaacggattacgagatgtattacggcttcaccagatttgctatagaa
cttaatgagctgtgcccgacgattaaagatcttattcctccaacggacgctcgttttaga
ccggatcaaagatttctagaagaagggaatgtagaagctgcaatcaatgaaaagcaaagg
atagaggatctgcagagatcaaggagaagatacatagaggaaaacaatatcaagtatcaa
ccgcgttttttcaagaaagtgattgatgccaatcagagagaaaagtgggtgaccaacaac
acctactgggaactacggaaagtccctggtttcagtaaattagaaaaccctcagctttgg
taa
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