Polyodon spathula (Mississippi paddlefish): 121323096
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Entry
121323096 CDS
T07273
Symbol
gigyf2
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121323096 (gigyf2)
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121323096 (gigyf2)
Surveillance factors
Other surveillance factors
121323096 (gigyf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
121323096
NCBI-ProteinID:
XP_041119794
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All DBs
Position
11:47197720..47317077
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AA seq
1298 aa
AA seq
DB search
MAAETQTLNFGPEWLRALSSGGSVTSPPLSPALPKYKLADYRYGREEMLALYIKDNKIPL
DLQDKEFLSILQEEPLPPLALVPFTEEEQRNFSMSVNSAAVLRLTGRAGGTVAGAPRGRS
SSRGRGRGRGEGGFYQRSFDEVEGGFGRGGREMHRSQSWEERGDRRFEKPGRKDPDVAPA
HFQLNPVRSNYEEGGATVVVAAAAARKHEFTRSESENWRTSREEQSNGPRSAGWRELPEQ
RRRFGLEPRGEEEQRGYRRAHSTSGSLEDEKDSLPEWCLEDADEEMGTFDSSGAFLSLKV
RGYELSTFPSLKKASKEPIPEEQELDFRPSEEGEDQSEQEESDPEENKEPAQTARKETER
KEDAEKSDNADVSAPSLPVEPKAREPSPPPLPERPTQSLPERVERLPGPELNPARTTPVS
NISQVTKIHPEMLPPVLTAQQKQLAPAFTPIPFPAGMALPHTNMGLLPDIDDDEGMKHLE
QEAEKMVAYLQDNALDDNRLSAKSLEQRGKSVALPGTHEAALKWFYKDPQGEIQGPFTNQ
EMAEWFQAGYFTMTLLVKRGCDEVFQPLGEIIKMWGRVPFAPGPSPPPLLGDLDQERLKR
QQELTALNLYQMQQLQYQYLLRQQYAQALAQQQKAALSTPQQQPQLRLLLQQYQALKMRA
SDQNLVPPVTRSMSVPDTGSVWELQTPCSQPSAWEGSSVWDLPVDSTTQASAPEQLQQLE
KVKAAKLEQERREVELRVKREEEERKRQQQQEEVLRRQQQEEERRHREEELTRRKQEAAR
QRQREQEAALQRQREEEAALKRQREEEEERQQEEARRRLEEEERRQREEQLRKQQEEQRR
QQEEAARWQREEMEALQRMEEEKQRLEEQEHKRKELELQKEAQRQQELARQRQQQQEALR
RLQQHQQQQQLAQMKLPSSSKWGQQSSAAALPQSQNTLSLAEIQKLEEERERESREEQRR
QQQELMKALQQQSQQQQAAKLLGWGGVAKQPATTKSLLEIQQEEARQVQKQHKQKPEQQQ
QNPPQNRAQNKALEGQLSNLNSSSGASAVLQSSISNSVWGSVSHSSPQWSVDVGSNSIWG
SAPNSKNSNMGFWDEAAKEVVPPARNSTAKSNTNLSNSMGVSARASKKEEEEEKLVKLFQ
GLNKTQDGFTQWCEQSLHTLNTANNLDVPTFVSFLKEVESSYEVHDYMRAYLGDTPEAKE
FAKHFLERRAKQRVNQQQKQQQQKQQQDSIWGVNRSEMQTILQSNHSSIQQSSFETVHSG
KKKKKQKMVRADPSLLGFSVNASSDRLNMGEIETVEDC
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaaacacagacacttaacttcggccctgaatggctccgggctctgtctagt
ggaggcagtgtcacctcccctccgctctcgccagcattgccaaagtataagttagcagat
taccgctatgggagagaagaaatgttagcactttacataaaggataataagattccctta
gacctacaagacaaggagtttctgtctattttacaagaggagcccctgccaccactggca
cttgtaccttttacagaagaagaacagagaaatttctcaatgtctgtaaacagtgcagct
gtcctgcgattaacaggaagagccggaggaacagtggcaggggcgccaagaggtcgaagt
tcctcaaggggtcgaggtcgagggcggggggaaggtgggttttaccaaagaagttttgac
gaggtggaaggtggatttggccgtggcgggagagagatgcacagatctcagagctgggaa
gaaaggggagacaggcggtttgaaaagcccggccggaaagatccagatgtcgcaccagcg
cactttcaactcaatcccgttagatcaaattacgaagagggtggcgcgacggtggtggtg
gcagcggcggcggcccgcaagcacgagttcacgcgatcggagagtgagaactggagaacg
tctcgggaggagcagagcaacgggccgcggtcagctggctggagagagctcccggagcag
cggcggcgctttggcttggagccgcgaggggaggaggagcagcgcggttatcgccgggca
cactccaccagcggcagtctggaggacgagaaggacagcctgcccgagtggtgcctggag
gatgctgatgaggagatggggaccttcgactcgtccggggccttcctgtctctcaaggtg
aggggctatgagctctcaaccttcccctcgctcaagaaagcttccaaggagccaatccca
gaggagcaggaactagacttcaggccgtccgaggagggtgaggatcaatcggagcaggaa
gagagcgacccagaagagaacaaggagcctgcccagactgccaggaaggagactgagaga
aaggaagatgcagagaagtctgacaacgctgatgtgtctgccccctccctccccgtcgag
cccaaggctcgtgaaccatcacccccccccctgccagagcgaccaacacagagcctcccc
gagagagtggagagactgcctggccctgagctcaatccagcacgcaccactcctgtctcc
aacatcagccaagtgacaaagattcatccagaaatgttgccccctgtcctgacagctcaa
cagaaacaactagctcctgctttcacaccaatcccattccctgcagggatggccctgccc
cacacaaacatggggctgctccctgacattgatgacgacgaagggatgaagcacctggag
caggaagctgagaagatggtggcgtacctgcaggataatgctcttgacgacaacaggcta
tcggccaagagtctggagcaacgaggaaagagtgtggctctgcccggaactcacgaggct
gcgctcaagtggttttacaaggacccccagggggagatacagggtcccttcaccaaccag
gagatggcagagtggtttcaggcagggtacttcacgatgactctgctggtgaagcggggc
tgtgacgaggtattccagcctctcggggagatcatcaagatgtgggggcgggtccctttc
gcacccgggccctccccaccccccttactgggtgacctggatcaggagcgcttgaagagg
cagcaggagctcacagccctcaacctgtaccaaatgcagcagctgcagtaccagtacctg
ctgagacaacagtatgcccaggctctggcgcagcagcagaaggcagccctgagcactccc
cagcagcagccccaactccgcctcctcctgcagcagtaccaggccctgaagatgagagca
tcggaccagaacctggttcctcctgtaaccaggtccatgtctgtacccgatacaggttca
gtatgggaactgcagactccatgctctcagccttcagcctgggaaggcagcagcgtctgg
gatttaccagttgattcaacgacacaggcgtcggctccagagcaactacaacaactggaa
aaagtgaaggcagctaagctggagcaggagaggagagaagttgagctgagagtaaaaagg
gaggaagaggagaggaagagacagcagcagcaggaggaggtgctgcggagacagcagcag
gaggaggagagaaggcacagagaagaggagctcacacggagaaaacaagaggcggcacgc
cagaggcagagggagcaggaggcggccctgcagaggcagcgtgaagaagaggcagccctg
aagagacagagggaagaggaggaggagaggcagcaagaggaggcccggaggaggctggag
gaggaggagaggaggcagagggaagagcagctacggaaacagcaggaggaacagcggagg
cagcaggaggaagctgcccgctggcagagggaggagatggaggctctgcagcgaatggaa
gaggagaagcagcggctggaggagcaggagcacaaacgcaaagagctggagctgcagaag
gaagcccagagacagcaggagcttgcgcgtcagaggcagcagcagcaagaggctctgcgc
agactccagcaacaccagcagcagcagcagctggcacagatgaagctgccgtcgtcttca
aaatggggccagcagtccagtgctgcagctctgccacagtctcagaacactctgtcactg
gctgagatccaaaaactggaggaggagagggagcgggagtcccgggaggagcagcggcgg
cagcagcaggagttgatgaaggctctccagcagcagtctcagcagcagcaggctgcaaag
ctgttaggctggggaggcgtcgccaagcagccagccaccactaaatccctgctggagatc
cagcaagaggaggcacgccaggtacagaagcagcacaaacagaaaccggagcagcagcag
cagaacccaccacagaaccgggcccagaacaaagctttggagggccagctgtctaacctg
aattcctccagtggagccagtgcagttctgcagagcagcatcagtaactctgtgtggggc
tccgtcagccacagcagcccccagtggagtgttgatgtgggcagcaacagcatctggggt
agcgcacccaacagcaagaactccaacatgggcttctgggacgaggctgccaaggaagtg
gtgccgcctgcgcgcaactccactgccaagagcaacactaacctgagcaactctatggga
gtgagtgcccgagccagtaagaaggaggaggaggaggagaagctggtgaagctgttccag
gggctgaacaagacccaggatggcttcacacagtggtgtgagcagagtctgcacacactc
aacacagccaataacctagacgttcctacatttgtttctttcctgaaagaggtggaatct
tcctacgaggtccatgattacatgagagcctacctgggagacacgcctgaggccaaggag
tttgccaagcacttcctggagcgccgtgccaaacagagagtcaaccagcagcagaaacag
cagcagcagaaacagcagcaggattcgatttggggagtgaaccgaagtgagatgcaaact
atcttacaatcgaatcacagctccatacagcagtccagctttgagacggtgcactctggg
aagaaaaagaaaaaacagaagatggtacgagcagaccccagcctgctaggattttctgta
aatgcttcgtcggatcgattgaatatgggcgagattgaaacagtggaggattgttga
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