Polyodon spathula (Mississippi paddlefish): 121323102
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Entry
121323102 CDS
T07273
Name
(RefSeq) histone deacetylase complex subunit SAP130-like isoform X1
KO
K19192
histone deacetylase complex subunit SAP130
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121323102
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
121323102
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SAP130_C
Motif
Other DBs
NCBI-GeneID:
121323102
NCBI-ProteinID:
XP_041119817
LinkDB
All DBs
Position
11:complement(42924831..42984226)
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AA seq
1072 aa
AA seq
DB search
MSSQQFPRSGVLASGLGSAQTMGANTGLTPGNPQSTGMGDEGSRDSDHGPRDHSSTGGAS
LPFRDEKQETVVVRPYPQVHTHGQPLTLAQHHTLQTGTAITVTAPPAHLAQAMPLPFPEG
LMKLWHTGQELSGTRTLSYDSLSVPVNEDGRLPYQPTQKPTVPSRPIAPAPASIQGHLPM
PPKVSGHVTVTMESSMPQASTIPVATISGQQGHTSNLHQLMAANVQMSIIRSSTPGPPLH
IGPSATPQHTFTSHLPRGAAAAAVMSSSKVTTVLRPASGPSTGTGQTTVQHIIHQPMQSR
PAVTTSTAVPPTVVATVSATRAQSPVITTATAHITDTGHGRPSLTIHPPSATISTQRQQS
TRDAATRIALPSHPALAAQKPQLHTMAQKPSIFSTVTPVAAATVAPILATNTLPSPTTAG
SMSHTQSATSTIVTMTMPPHSSNATAATTSTIPVAKVVPQPIAHTSPRIQPDYQGERGNL
ISISGHRSSPNPIAMEGRNDNRQPVPVSVPVQFQYFQYSPLAHTYTPITSSVSTIRQFPV
SAQAPSSAIPAQAGVGVHLNPVQLMTVEASHRLGLQAAPIGTQGIQTATLGTQGIQPAPI
GTQGLHPAAPIGTQGIQTTPIGAQQTEAKSVVLADGSTLVANPISNTFSATPAGATTVVQ
TNVPTLVSSPRPSILRKKPHNEGSAVRKSLIPVQAAETTSPRIDSTMRSASGSPRLAGAK
PKPEIQVEALSNQSSEQQAFPAPSQHPSQTISAILTAAAPPPPSQPTAAQSALPAAMAVM
PPIPASMANVVAPPTQPAASSTAVSAVSSAFPEIKIKQEVEPMETVPTLPPTVPPALAPF
GSSLGLPSGDIPPGASPRKKPRKQQHVITEESEMVETNSTDEEKSSARPLAGKAEKRKLP
PKEYIDEEGVRYVPVRPRPPVTLLRHYRNPWKAAYHHFQRYSDIRVKEEKKSTMQEIANQ
KGVVCRVQGWKIHLCAAQLLQLTNLEHDVYSRLSTLQEGLIPKKKAGADDDLHRINELIQ
GNMQRCKLVMDQITEAREAMMKMLDHKDRVMKLLNKNGGSKKVSKLKRKEKA
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgagttcccagcaatttccaaggtctggagttctagcctctggtttggggtcagcacag
acaatgggggccaacactggtctgacccccggaaaccctcagagcacagggatgggggac
gaaggtagccgggattcagaccatggtcctcgtgatcactcttccactggcggggcctcc
ctacccttccgggatgagaagcaggagacagtggtggtgagaccctacccacaggtccac
actcatggacagcctctaacgctggcccagcaccacacattacaaacaggcacggccatc
acagtcactgcccctcctgctcaccttgctcaggccatgcccctgcccttccctgagggg
ctcatgaagctttggcatactggacaagagctgtctgggacaaggacactgtcatacgat
tccttgagtgtcccagtgaatgaggatgggcggttaccgtaccagcctacccagaagcct
acagtgcctagccgccccattgccccagcaccagcgtccattcagggtcaccttcccatg
ccacccaaagtctccggtcatgtcactgttaccatggagagcagcatgcctcaggcctcc
accattcctgtggcaaccatcagcgggcagcagggacacaccagtaacctgcatcaactt
atggcagccaacgtgcagatgtccatcatccggagcagcacccctggacctcctctgcac
ataggaccttcagcaacaccccagcacactttcacctcccacttacccagaggagcggca
gctgcagcagtgatgtccagctccaaagtgaccacagtgctgcgaccagcctctggaccc
agtactggaacaggacagaccacagtgcagcacatcatacaccagccaatgcagtctcgc
cctgctgtaaccacgtccacagcagtgccacccactgttgtggcgacagtgtctgcgaca
agggctcagtctccagtgatcactaccgccacggcgcacataaccgacactgggcatggg
cgaccatcgctaaccatccatcctccctcagccaccatcagtacccaacggcaacagtca
acccgagatgcagccacacgcatcgctctgccttcacaccctgccctcgccgcccagaaa
ccacagctacacacgatggcacagaagccctcaattttcagcacagtgactccagttgct
gcagctacagtggcaccaattcttgcaaccaacactcttccatcacctacaaccgcaggc
tccatgtcccacacacagtctgcaaccagtaccattgttaccatgacaatgccccctcac
tcctcaaatgcaacagcagccacaacctccacaatcccagtggctaaggtggtccctcag
cccattgctcatacttctccccggatccagcctgattaccaaggtgaaagaggcaacctc
atttccatttcaggtcataggtcatcgccaaacccaatcgcaatggagggcaggaatgac
aacaggcagcctgtgccagtgtctgtgccagtgcagttccagtacttccagtacagtcca
ctggctcacacctacacacccatcaccagctctgtctccaccatccgccagtttccagtt
tccgctcaagctcccagttcagccatccctgctcaggctggtgtaggggtccacctgaac
cccgttcagctaatgacagttgaagcttcccaccgcttggggctccaggctgcaccaatc
ggcacacaaggaatccagactgcaacgttgggtacacagggaattcagccagctccaata
ggaacacaggggctccatcctgcagcaccaatcggcacccagggaatccagaccacacca
atcggcgcacagcagactgaggccaagtcagtggttttggcagatggttccactcttgtt
gccaaccccataagcaacacgttcagtgccactccagcaggcgccaccacagtggtgcag
actaatgtgccaacactggtctcctccccgcgccccagcattctccgcaagaaaccacac
aatgaggggtctgcggtgcgtaaaagcctgatcccggtgcaggcagctgaaacaaccagc
ccacggatagacagcactatgaggagcgcgtctgggtcaccgcgactggcaggagcaaaa
ccaaaaccagagatacaagtagaggctttgtccaatcagagcagcgagcagcaggcattc
ccagccccatcccagcacccctcacaaactatttcagccatcttgacggcggctgctcct
cctcctccttcccagccaacagcagctcagtcagcacttccagcagccatggctgtgatg
ccgcccatccctgcctcaatggccaatgtagtggcccctcccacccaaccagcagcgagt
agcacagcagtctcagccgtcagctctgccttcccggagatcaaaatcaaacaggaggtg
gagcctatggagacagtgcccacgctgcctcccacagtgccccctgccctcgccccattt
ggcagctctctggggctcccttcaggggacataccccctggcgcctcccccaggaaaaaa
cctcgcaagcagcagcatgtcatcacagaggagagcgagatggtggagaccaacagcaca
gatgaggagaaatccagtgccaggccccttgccggcaaggctgagaaacgcaagttaccg
ccaaaggagtacatagatgaggagggcgtacgttatgtgccagttcgcccccggccaccg
gttaccttgcttcggcactaccgcaatccgtggaaggctgcctatcaccacttccagaga
tacagtgacattagggtgaaagaagagaagaagagcaccatgcaggagattgccaatcag
aagggtgtggtgtgcagagtgcagggctggaagatccacctgtgtgcagcacagcttcta
cagctgacgaacctggagcatgacgtgtacagccggctgagcacgctgcaggaagggctc
attcccaagaaaaaggcaggagctgacgatgacctgcaccggatcaatgagttaattcag
ggtaatatgcagcgctgcaagctggtgatggatcagatcacagaggcccgggaagccatg
atgaagatgctggaccacaaggacagagtcatgaagctgctgaacaagaatggcgggtcc
aagaaggtgtctaaactgaaacgcaaggagaaagcttag
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integrated database retrieval system
