Polyodon spathula (Mississippi paddlefish): 121323171
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Entry
121323171 CDS
T07273
Symbol
fxr1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121323171 (fxr1)
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121323171 (fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
121323171 (fxr1)
mRNA cycle factors
Stress granule specific factors
121323171 (fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
Agenet
KH_1
FXR_C3
KH-I_KHDC4-BBP
KIF2A-like_1st
Motif
Other DBs
NCBI-GeneID:
121323171
NCBI-ProteinID:
XP_041119984
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All DBs
Position
11:36414127..36431229
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AA seq
674 aa
AA seq
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MEELMVEIRGSNGAYYKAFVKDVHEDSLTVAFENNWQPERKVPFSNVRMPPPPDVKKEIG
EGEDVEIYSRANEQEPCGWWLAKVRMMKGDFYVIEYAACDATYNEIVTFERLRPVNLNKA
VAKNTFFKCTIPVPDDLKAACENELAHKEFKKAIGACRIFYHADTSQLVVLSMNEATVKR
VTILSDMHLRSIRTKLMLMSRNEEATKHLESTKQLASAFHEVFTVREDLMGLAIGTHGSN
IQQARKVPGVTAIELDEDTGTFRIYGESAEAGQKARSYLEFIEDSVQIPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDKDNKLPREEGMVPFTFVGTKENIGNVQVLLEYHIAYLNE
VEQLRLERLQIDDQLREIGVGFRPSSNRNADKDKGYTTDESTSAPSLHGSRSYSGRGRGR
RGPIYTSGYGTNSELSTASETDSERKDELSDWSLAGEDHDREPRHQRDSRRRPATGRGRG
GPGGRARGGGRGASSSISSVLQDPDSNPYSLLDNTETDQTADTDTSDSHHNISRRRRSRR
RRTDEDATLIDGLTEPDNASVNENGVDDLEGKSQRCNRSCRHCFCSQAEERLPVTVADYI
SRTESQSRQRTPARDSLTKMGQVDLIEEQSTAAMESKACGDEPRKPQHTPTKGTQQVKYQ
GDGNQPQAVLNGIS
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggaggaactgatggtggagattcgcggctcaaacggagcttattacaaggcatttgtc
aaagatgttcatgaagattcactcaccgttgcctttgaaaacaactggcaaccagagcgt
aaggttcctttcagcaatgtgcgcatgccgcctcctccagatgttaaaaaggaaatcggt
gaaggtgaggacgttgagatttattcaagagcaaatgagcaggagccttgtggttggtgg
cttgcaaaagtgagaatgatgaagggtgatttttatgtaattgaatatgctgcatgtgat
gccacatataatgagatagtcacctttgagcgtcttcgtccagtgaaccttaacaaggct
gtggcaaaaaataccttcttcaagtgtacaattccagtaccagatgatttaaaagctgcg
tgtgaaaatgaacttgcacataaagagttcaaaaaagcaataggggcatgtcgcatcttc
taccatgcagacacaagccaattagtagtactgtcaatgaatgaagccacagtcaagaga
gttacaatactaagtgacatgcatttgcgcagtattcgcacaaagttaatgcttatgtca
agaaatgaagaagcaacaaagcacctagagagcacaaagcagttggcttctgcattccat
gaggtatttactgttagagaggatctgatgggtttggcaattggaactcatggtagtaat
attcagcaagcaaggaaagtacctggagttacagcaattgaactggatgaagataccggc
acattcagaatttatggagagagtgctgaagcaggacagaaagcaaggagttaccttgag
tttattgaagactctgttcagattcccagaaatttggttggtaaggtcattggtaaaaat
ggaaaagtcattcaagagattgtggacaaatctggagttgtgcgagtaaggattgaaggt
gataaggacaataaacttcctcgagaagagggaatggttccttttacatttgttggcaca
aaggagaacatcggaaatgttcaagttcttctggaataccacattgcttacctaaatgaa
gtggaacagctaagactggagaggcttcagattgatgaccagctgagggaaataggagtg
gggtttaggccttcctccaaccgcaatgctgataaagataaaggctacacaacagatgag
agcacgtctgctccctccctgcatggcagcaggtcttacagtggcagaggtcgtggtcgc
agaggccctatttacacctctggttatggtacgaactctgaactgtccactgcatctgaa
actgattcggagagaaaggacgagctgagtgactggtcgttggcaggggaagatcacgat
cgggaacctaggcaccagcgggacagcaggaggcggcctgccactgggagagggcgtgga
ggtcctggaggcagggcccgtggagggggcagaggggctagcagctccatcagctctgtg
cttcaggatccggacagcaatccctacagtttactagataacactgaaacagatcagact
gctgacactgacaccagtgattctcaccacaacatcagccgacggagacggtcacgtagg
cgtaggactgatgaagatgctaccctcattgatggattgactgagcctgataatgcttca
gttaacgaaaatggtgtagatgatttggagggtaaatcccagcggtgtaaccgtagctgt
aggcactgtttttgcagtcaggcagaagagaggctgccagttacagtagcagattacata
tcccgtacagaatcacagagcagacagagaaccccagcaagggatagtttgacaaaaatg
ggtcaggttgatttaattgaagaacaaagcactgcagctatggaaagcaaagcttgtggt
gacgaaccgagaaagccacaacatactcccacaaaaggaacccagcaagtgaaatatcaa
ggagatggaaatcaaccacaagctgtccttaatggcatctcttaa
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