Polyodon spathula (Mississippi paddlefish): 121323228
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Entry
121323228 CDS
T07273
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-4-like isoform X1
KO
K04865
voltage-dependent calcium channel beta-4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04260
Cardiac muscle contraction
pspa04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121323228
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121323228
04261 Adrenergic signaling in cardiomyocytes
121323228
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121323228
Ion channels [BR:
pspa04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121323228
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Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
Motif
Other DBs
NCBI-GeneID:
121323228
NCBI-ProteinID:
XP_041120082
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Position
11:5175221..5218015
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AA seq
563 aa
AA seq
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MKLHNHTQALAGVRAETETGTDNSLLRLPFGWGKNKSPTWTNDLSEMSRQLYTRHKIGDG
LQKPIFQVTRGTQSRRSRLKRSDGSTTSTSFILRQGSADSYTSRPSDSDVSLEEDREGVG
QEREQQAALQLERAKAKAVAFAVKTNVSYCGALDEDVPVAGTGISFDAKDFLHIKEKYNN
DWWIGRLVKEGCEIGFIPSPLKLENIRIQQEQKRGRFHGKSSGNSSSSLGEMVSGTFRAT
PPSAAKQKQKVTEHVPPYDVVPSMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRFDGRIS
ITRVTADISLAKRSVLNNPSKRAIIERSNTRSSLAEVQSEIERIFELARSLQLVVLDADT
INHPAQLIKTSLAPLIVHVKVSSPKVLQRLIKSRGKSQSKHLNVQLVAADKLAQCPPEMF
DIILDENQLEDACEHLAEYLEAYWRATHAPSSTPMNPLLGRNLGSTALSPYPAAISGLQG
QRMRHNNHSGDHSPIERRSLMTSDENYHSERARKSRNRLSSGSQHSRDHYPLVEEEYDYQ
DTYKPHRTRGSPGGYSHDSRHRL
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaagctccacaaccacacgcaggcactcgccggtgtaagagcagagacggagactggg
actgacaattcacttctcagattaccgtttggctggggaaaaaacaaatctcccacctgg
acaaatgatctatcggagatgtccagacagctttacaccagacacaagattggagatgga
ctgcaaaaacccatctttcaggtgactagaggaactcagtccaggagaagcagactaaag
agatctgatggcagcaccacctccaccagctttattctgagacagggttcagcagactcc
tacactagcaggccgtctgattccgatgtctctctggaagaggaccgggagggagtcggg
caggagcgagagcagcaggcggcactgcagttggaaagggccaaggccaaggcggtagcg
ttcgcagtgaagaccaatgtgagttactgcggcgccctggacgaggatgtaccggtagca
ggcactggcatttccttcgatgccaaggactttctacacattaaagagaagtacaacaat
gactggtggataggacgcctggtgaaggagggctgtgagattggatttataccaagcccc
ctcaaactggagaacatccgaatccagcaggaacagaaaagggggcgcttccacggtaag
tccagtggaaattcctcttcaagtctaggagagatggtctctggcacgttcagagctaca
cccccctccgcagcaaagcagaaacagaaagtgacagagcacgttcctccatatgacgtg
gttccctccatgaggcccgtggttctggtcggcccatcattgaaaggatatgaggtgaca
gacatgatgcagaaagctctctttgacttcttgaagcacaggtttgatggaaggatatct
atcacaagagtcactgcagacatttctctcgccaagcggtctgtgctcaataaccccagc
aagagagccatcattgagcgctcaaacaccaggtctagtttagctgaggtgcagagtgaa
atagaaagaattttcgagttggcacggtcgctccagttagtagttctggatgctgatacc
ataaaccacccagcacagcttatcaagacatctttagcacctcttatcgtccatgtcaaa
gtgtcatcaccaaaggttctgcagagattgataaaatccagagggaaatcccaaagcaaa
catctgaatgtccagttggtggccgctgacaagctagcacagtgccctccggaaatgttt
gatatcattttggatgagaaccagctggaagatgcttgtgaacacttggccgagtacctg
gaggcctattggcgtgccacgcatgcccccagtagcactcccatgaatcctctgctggga
cggaacctgggctccacggcgctctccccgtaccctgcagctatctctgggttacagggt
caaagaatgaggcacaacaaccattctggagaccactccccaattgagcgtcggagcctg
atgacctcggacgagaactaccacagcgagagggcaagaaagagccggaaccgcctgtcg
tcaggctcccagcacagccgggaccactacccgctggtggaagaagagtacgactaccag
gacacgtacaaaccacaccgcacccgcggctctcctggcggctacagccacgactcaagg
cacaggctttga
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