Polyodon spathula (Mississippi paddlefish): 121323286
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Entry
121323286 CDS
T07273
Symbol
zgc:162872
Name
(RefSeq) BAR_ACAPs and ArfGap_ACAP domain-containing protein isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121323286 (zgc:162872)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121323286 (zgc:162872)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121323286 (zgc:162872)
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121323286 (zgc:162872)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
121323286 (zgc:162872)
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121323286 (zgc:162872)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
BAR
Ank_5
Ank_3
PH_11
PH_8
Serine_rich
DUF1631
Motif
Other DBs
NCBI-GeneID:
121323286
NCBI-ProteinID:
XP_041120189
LinkDB
All DBs
Position
11:complement(43290456..43321042)
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AA seq
726 aa
AA seq
DB search
MDSLVDFEECIKDSPRFRRSLGESESEVTELENRLDKLVKLCNRMVEAGQAYNEANQLFL
GGVAEFSQYYRKDSTVTTCLTHFTQGLQEMIHFHMMLFDQAQRSVTQQLQTLLTDSIPQL
REARKEFSRITEDLEQAAAKSAQAARHKAQDAEKASHLLLATRKCFQHIALDYSLQLNHF
KMQQKVDILNSLFSYFHAQYTFFHQGYDLLKDLDPSMKKMAIRLAQLSTDCTEKRKQLEH
THLLVQQRDAAEDSVVTLSPLNGVTIQGYLFKRSKRKIKNWNRRWFSIQNNQLVYMKSHK
EEPIILVDDLRLCTVKALDTTERRFCFEVVSVQMSCALQADSEGLRQAWITAVQGSIDLA
YRQETEPTHTLAVSSLPSPQTPPLRQDQAPHRPPIMGLVHQVAGNEQCCDCSQAEPRWAS
INLGITLCIECSGIHRSLGVHLSKVRSLTLDSWEPEQLKLVCGLGNNAINQIFEAHCEEG
MVKVTASSSRQEKESWIKAKYVEKRFVKKISSPQSDSSLSGDQTGHSAGGLGLQLYKASR
EGDLITMASALAQGAGVNWTNPEEEGRTPLINAACGGSLVACEFLLQNGANVNHRDHRGQ
GALHTATYWGHTGQVCLFLKRGANQYAVDERGKDPLSIAMETAHADIVTLLRMARMNEEM
RDSEGFFGPMGDDETFQDIFRDFTHMASNDPEKLSRRQFEREKEKRDECEGSENEGGAGK
AEGGGR
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggatagtctggtggatttcgaagagtgtattaaggattctcccagattcaggaggagt
ctgggtgagtctgagagcgaggtgactgaactggagaacagactggacaagttggtgaaa
ctttgcaacaggatggtggaagcgggacaggcatacaacgaagccaatcagctgtttttg
ggcggggttgcagagttttcccaatactatagaaaagacagcacagttacgacctgcctg
acgcacttcacacaggggctgcaggagatgatccatttccacatgatgctgttcgatcag
gctcagagatcagtgactcagcagcttcagaccctgctcacagactcaatcccccagcta
agggaggcacggaaggagttctcccggatcactgaggatttggagcaggctgcagcgaag
agcgcccaggccgctcgacacaaggcccaggacgctgagaaagccagtcacctgctacta
gccacccggaagtgcttccagcacattgccctggactacagtctgcagttgaatcatttt
aagatgcagcagaaggtggatattttgaattcgctcttctcctatttccatgcccagtac
acatttttccaccaaggctatgatcttctcaaggacctcgacccttctatgaagaagatg
gcgattcggctagctcagctgtccactgactgcactgaaaaaagaaagcagctggagcac
acacacctcctggttcagcagagggacgctgctgaagacagtgtggtgacattaagccct
ctgaacggggtcacgatccagggctatttgtttaagcgttcgaagaggaaaataaagaac
tggaacagacggtggttttccattcaaaacaaccagctggtttatatgaaatcacataag
gaagaacctattatattggtggatgatctgagactgtgcactgtgaaagccctggatacc
accgagagacggttttgttttgaagttgtgtcggtgcaaatgagctgtgcactgcaggca
gattctgaagggctgagacaggcctggatcaccgcagtgcagggtagcatcgacctggcc
taccgccaggaaacagagccgacacacacgctggctgtgtcgagcctgccctccccccag
acccctcctctgaggcaggaccaggcccctcacaggcctcccatcatggggctggtgcat
caggtggctgggaacgagcagtgctgtgactgcagccaggcagagcctcgctgggctagc
atcaacctgggcatcacactctgcatcgagtgctcagggattcacaggagtctgggagtt
catctgtcaaaggtccgatcactgactctggattcctgggagcctgaacagctgaagtta
gtctgtggtttggggaacaatgctatcaaccagatctttgaagcccactgtgaagaaggg
atggtcaaagtgacagccagcagctcaagacaggagaaggagtcctggattaaagcgaaa
tatgttgagaagagatttgtcaagaagatttcttctccacagtcagactccagcctatct
ggtgaccagacaggccacagtgccgggggtctggggctgcagctgtacaaggcctctcga
gagggagatctgatcaccatggcaagtgcactggctcagggagcaggcgtgaactggacc
aaccctgaggaggaggggagaacaccactgatcaacgcagcctgtgggggctcgctcgtg
gcttgtgagttcttgctgcagaatggagccaatgtgaatcacagagaccatcggggtcaa
ggggctctgcacaccgccacctactgggggcacactggtcaggtgtgtttgtttcttaag
agaggagccaatcagtatgcagtagatgagagagggaaggacccactcagcatcgccatg
gaaacggcccacgcagacattgtaacactgttgcgcatggctcggatgaacgaggagatg
agggattcggagggcttcttcgggccgatgggtgacgatgaaaccttccaggacatattc
cgtgatttcacccacatggcctccaacgacccggagaaactgtcgagacgccagtttgag
agagagaaagaaaagcgggatgaatgtgagggaagcgagaatgagggaggggctgggaag
gcagagggtggagggaggtga
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