Polyodon spathula (Mississippi paddlefish): 121323296
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Entry
121323296 CDS
T07273
Name
(RefSeq) nuclear cap-binding protein subunit 2-like
KO
K12883
nuclear cap-binding protein subunit 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03013
Nucleocytoplasmic transport
pspa03015
mRNA surveillance pathway
pspa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121323296
09122 Translation
03013 Nucleocytoplasmic transport
121323296
03015 mRNA surveillance pathway
121323296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121323296
03041 Spliceosome [BR:
pspa03041
]
121323296
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
121323296
Spliceosome [BR:
pspa03041
]
Common components
Common spliceosomal components
Cap binding complex
121323296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
121323296
NCBI-ProteinID:
XP_041120209
LinkDB
All DBs
Position
11:38675025..38677948
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AA seq
153 aa
AA seq
DB search
MSILNALRSDSYVDISQYRDQHFKGNRYEQEKLLKLSCSLYVGNLSFYTTEEQVYELFSK
SGDVKRIVMGLDKVKKTACGFCFVEYYTRADSEHAMRFVNGTRLDDRIIRTDWDAGFKEG
RQYGRGKSGGQVRDEYRQDYDPARGGYGKIIKK
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcctaaatgcgctaaggagtgactcatatgttgatatcagccagtacagagac
cagcattttaagggaaatcggtatgaacaggagaaactactgaaactgagctgctcgctc
tatgtggggaatctgtcattttatacaacagaagaacaagtttatgaactcttctccaaa
agtggtgatgtgaaacgaattgtcatgggtctggataaagtcaagaagactgcgtgtgga
ttctgttttgtggaatactatactcgtgctgattcagagcatgctatgaggttcgttaat
ggcacaaggttggatgatcgcataatcaggacagactgggatgctggtttcaaagaaggc
agacagtatggccgtggcaaatctggtggccaggttagagatgaatacagacaagattat
gatcctgccagaggtggctatggaaagatcataaagaaatga
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integrated database retrieval system
