Polyodon spathula (Mississippi paddlefish): 121323332
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Entry
121323332 CDS
T07273
Name
(RefSeq) ATP-binding cassette sub-family F member 3-like
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pspa03012
]
121323332
Translation factors [BR:
pspa03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
121323332
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
PWI_ABCF3
ABC_tran_Xtn
AAA_21
SMC_N
AAA_22
AAA_29
MMR_HSR1
AAA
RsgA_GTPase
AAA_24
AAA_23
NACHT
ATP-synt_ab
AAA_15
DUF1672
DUF87
TXNDC16_3rd
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
121323332
NCBI-ProteinID:
XP_041120266
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All DBs
Position
11:complement(27690583..27707253)
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AA seq
714 aa
AA seq
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MATYVEILRSEFPEIDSEVFDYITGVLDCGGADFVDGEEVFEAIGGVLQEVSADSKNEDD
IRDICQQMFNTLKLNDCNSAKQQVLLDAPVQLSALSSAKDCGTASNDIQGIWMIKRGQNS
KAVDAKRLEKAEAKLKAKHERRTEKDSQKVTVPLVLEEASASQASNKKDTRIETSGKNKT
YDIRIENFDVSYGERSLLQGAEVTLSYGRRFGLVGRNGLGKTTLLKMMASRSLRVPTHIS
ILHVEQEVAGDETPALQSVLESDSVREGLLREERELNRRISSGQADGMESAKLTEVYAKL
EEIEADKAPARASVILAGLGFSAKMQQQTTKEFSGGWRMRLALARALFAKPDLLLLDEPT
NMLDVKAILWLENYLQTWQSTILVVSHDRNFLNAVATDIIHLHSQRLDTYRGDYENFVKT
KEDRQKSQLREYEAQKQYRDHIQVFIDRFRYNANRAAQVQSKLKLLEKLPELKPVEKETE
AVLRFPDNFEKLSPPVLQLDEVEFYYSPDRHIFKNLCVSADLESRICIVGENGAGKSTML
KLLMGELSPVSGIRQGHRNLKIGYFSQHHVDQLDLNVNSVELLLNKFPGRTEEEYRHQLG
GYGITGELAVRPVASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIEALAKALNK
FKGGVVLVSHDERLIRMVCKELWVCENGTVRRIDGGFDEYREILQEQFRKEGYL
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttacgtggagattctgaggagcgagtttcccgaaattgacagtgaagtcttc
gattatatcaccggtgttctggactgcggaggggctgattttgtggatggggaggaggtc
ttcgaagccatcggtggggtcctacaggaggtgtctgccgactccaaaaacgaggatgac
atccgggacatctgccaacagatgttcaacacgctgaaactgaatgactgtaattcagcc
aagcagcaagtgttgctggatgccccagttcagctctcggctctcagttctgcgaaagat
tgtgggacggcatcaaatgacattcaaggcatttggatgatcaagagaggtcagaattca
aaggcggtagacgcaaagagactggaaaaagctgaagccaaactgaaagcaaaacacgag
aggaggacagagaaggattcccagaaagtgactgtcccgctggtcctggaggaagcttcg
gccagtcaagcctccaacaagaaggacactcgcatcgagacgtctgggaagaacaagaca
tacgatatccgcattgagaactttgatgtctcctatggagaacgctctctgctgcaaggg
gcggaggtgacgctgtcgtacggccgccgctttggtttggtggggaggaatggcctgggc
aagaccaccctgctgaagatgatggcgagccgcagcctgcgcgtgcccacgcacatcagc
atcttgcacgtggagcaggaggtggcaggagacgagacgccggccctgcagagcgtgctg
gagagtgacagtgtgagggaggggctgctgagagaggagagggagctcaacagacgtatc
agtagcggacaagcggacgggatggagagtgcgaagctgacagaggtctacgccaagctc
gaagagattgaagctgacaaagcaccagcaagagcatctgtgatcctggctgggttgggt
ttctctgctaagatgcagcaacagaccaccaaggagttctctggaggctggagaatgagg
ctggcattagccagagcgctatttgcaaagcctgatcttctgttacttgatgagccgaca
aacatgttggatgtcaaggccattctgtggctggagaactacctgcagacgtggcaatcc
acgatcctcgtggtgtcccacgaccggaatttcttgaacgccgtggcgacggacatcatc
cacctgcactcgcagcggctggacacgtaccgcggggactatgagaacttcgtgaagacc
aaggaggaccggcagaaaagtcagctgcgcgagtacgaggcgcagaagcagtacagggac
cacatccaggtgtttatagacaggttccgatacaatgcaaaccgggccgcccaagtgcag
agcaagctgaagctgctggagaaactacctgaattgaaacctgtggaaaaggaaacagaa
gctgttttacgatttcctgataactttgagaagctgtcccccccagtgctgcagcttgat
gaggtggagttttattactccccagatcggcacatattcaagaatctgtgtgtctctgcc
gacctggagtccagaatctgcatcgtgggtgagaatggtgctgggaaatccacgatgttg
aaactgctcatgggggagctgagtccagtcagtggaatacgacagggacacaggaatctg
aagattggttatttcagccagcaccacgttgatcagctggacctgaacgtgaactctgtg
gagctgctgttaaacaagttcccaggccggaccgaggaggagtacaggcaccagctggga
gggtacgggatcacaggggagcttgctgtgcgccccgttgccagcctgtccggggggcag
aagagcagggtcgcctttgcacagatgaccatgccatgccccaacttctacattctcgat
gagccgacgaaccacctggacatggagacaatcgaggccctggcgaaagccctgaataag
tttaaggggggggtcgtgctggtttcccacgacgaacggctcatccgcatggtgtgcaag
gaattgtgggtctgcgagaacgggacggtccggagaatcgatggcggcttcgacgagtac
cgagagattctacaggagcagttccgcaaggagggatatttataa
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