Polyodon spathula (Mississippi paddlefish): 121323556
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Entry
121323556 CDS
T07273
Symbol
gtf3c3
Name
(RefSeq) general transcription factor 3C polypeptide 3 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121323556 (gtf3c3)
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
121323556 (gtf3c3)
TFIIIC, fungi type
121323556 (gtf3c3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_8
TPR_19
ANAPC3
TPR_CcmH_CycH
TPR_12
TPR_11
TPR_15
TPR_MalT
TPR_EMC2
TPR_4
ARM_TT21_C
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
121323556
NCBI-ProteinID:
XP_041120613
LinkDB
All DBs
Position
11:complement(4383467..4395268)
Genome browser
AA seq
911 aa
AA seq
DB search
MKNRSLQRNCGVLLTLSLHTIFCFHFVRIMSGFSPELIDYLEGKISFEEFEKLREERKAR
DKDAEGGGGSEDEAELPPVEEDLPSTSEVSTRKRRRSAGCEEEGVSRSVQRAFASMLGEG
GDEEDEEDDGEEDEEGDDEEHTETLSAGDVFALEIELNRENKKMLKERRHRSKLPKALRG
LMGEANIRYARGDKEDAITMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFGLIAAH
LNPSNREEWVKLAEMSLEQDNIKQAIFCYSKAIKYDHSNVRYLWERCSLYEQVGEHKLAM
DGYRRILNLLPPSDGEHFMQLSRDMAKSYYETNDLVSAIGVMEEALAKHPSLVTVEGVNM
AAELYISNKEYPKALEVMLQFCGISLERISCEEQCAERDESEEVCSVEIPEDVPVDIRVK
LMVCLIHMQMLKPLDVLLTCLMEQSPEEMGDLYLDVAEAFLDIGEYNSALPLLSALVCSE
RYNLPVVWLRHAECLKALGHMAVAVESYSKVVEMAPLHLDARISLSTLQQQLGRPEKALE
ALEPMHDPDTLAQDSGAAQQELKLLLHRSTLLKSQGKMYDYVDTLLTMLAMLLKVAMNRA
QVCLISSSCSGERHLYLIKVSRDKISDIDDQEAAYLDVIGKTSVLAKEDWWQLLLRSVYT
LCELSRFKEAELLVDSSLEYYSFYDDRLKRKELEYFGLSAAILDKNFRKAYNYIRLMLMD
NVDRPQLWNVFNQVTMQSQDVRHHRFCLRLMLKHPENHALCVLNGHNAFVSGSFKHALGQ
YVQAFRAQPSEPLYSLCVGLTFIHMASQKFVLKRHPLLLQGFSFLNRYLELRGPCQESFY
NMGRALHQLGLVHLGIHYYQRALTCPAPHLEGIEDDQVDLRREIAYNLSLIYQSSGNMVM
ARHLISTYCTI
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaccgttcattgcagaggaattgtggcgtgctgctgacattatcgcttcataca
attttctgttttcattttgtccgaatcatgtcgggtttcagccccgagctgatcgattac
ctcgaagggaagatttcttttgaggagtttgagaaactgagagaggagaggaaggcgagg
gacaaggatgctgaaggaggcggcggcagtgaggatgaggctgagttgccccctgtggag
gaagatctccccagcacgtccgaagtgagcacaaggaaacggcgccgctctgcagggtgc
gaggaggagggggtgagccggtcagtgcagcgtgcgttcgcctcgatgttgggagagggg
ggggacgaggaggatgaggaagatgacggtgaggaggacgaggagggggatgatgaagag
catactgagaccctctccgcgggggacgtctttgcgctggagatagagctcaaccgagag
aacaagaagatgttgaaggagaggcgtcaccgcagcaaactgcccaaggctctgcgtggt
ctgatgggggaggctaatatccgctacgcccgcggggataaggaggatgccatcacgatg
tgcatggagatcatcaggcaagctccgctggcctacgagcctttctccactctagccatg
atctacgaagaccagggcgacatggagaagtcactccagttcggcctcatcgccgcacat
ctcaaccccagcaaccgagaagaatgggtcaagctggcagaaatgtccctggagcaggac
aacatcaagcaggccatcttctgctactccaaagccatcaagtatgaccacagcaacgtg
cgctacctgtgggagcgctgcagcctgtatgagcaggtgggggagcacaagctggccatg
gatgggtaccggcgcatcctcaacctgctgccccctagtgacggggagcacttcatgcag
ctctccagggacatggccaagagctactacgagactaacgacctggtgtctgcgatcgga
gtgatggaggaggcgctcgcgaagcaccccagtctggtcactgtggagggggtcaacatg
gcggccgagctctacatctccaacaaggagtaccccaaggccctggaggtgatgctgcag
ttctgtgggatttctctggagaggatctcttgtgaagagcaatgtgcagagagagatgag
agcgaggaggtgtgcagtgtggagatcccggaggacgtgcctgtggatatccgggtcaag
ctcatggtgtgtctcatccacatgcagatgctgaagcctctcgacgtgctgctgacctgt
ctgatggagcagagccccgaggagatgggggatctctacctggatgtggccgaggctttc
ctggacataggggagtacaactcagccctgcctctgctgagcgcgctcgtctgctcagag
aggtacaacctgcccgtggtgtggcttcggcacgcagagtgtctgaaggcattggggcac
atggcagtggctgtggagagctacagtaaggtggttgagatggcccctctgcacctggat
gccaggatctccctgtccactctgcagcagcagctgggccggccggagaaggctctggag
gctctggagcccatgcatgaccctgacacactggcacaggactcgggggcagctcagcag
gagctgaagttgctgctccatcgctccacgctgctcaagtctcaagggaagatgtacgac
tacgtggacactctgctcaccatgctcgccatgctgttgaaggtcgcaatgaacagggcc
caggtgtgcttgatttcaagctcctgctctggggagagacacctgtacctcatcaaggtg
tcccgggacaaaatctcagacattgacgaccaggaggctgcctacctagatgtgataggt
aagacgagtgtgctggcgaaggaggactggtggcagctgctgctccgctctgtgtacacg
ctgtgcgagctgagccgcttcaaggaggccgagctgctggtagactcctccctggagtac
tactccttctacgatgaccgactcaagaggaaagagcttgagtacttcggcctgtctgca
gccatcctggacaagaacttccgcaaggcctacaactacatccggttgatgctaatggac
aatgtggatcgaccccagctgtggaatgtttttaaccaggtgacgatgcagtcccaggac
gtgcggcaccaccgcttctgcctgcgcctcatgctgaagcaccctgagaaccacgcgctc
tgtgtgctcaacgggcacaacgcctttgtctcgggcagcttcaagcacgccctgggtcag
tacgtgcaggcgttccgagcccagccctccgagcccctgtacagtctttgtgtcggcctc
accttcatacacatggcctctcagaagttcgtcctaaagcgccaccctctgctgctgcag
ggcttctccttcctgaaccgttacctggagctgcgggggccctgtcaggagagcttctat
aacatggggagggctctacaccagctgggcctggtgcacctgggcatccactactaccaa
cgtgccctcacctgccctgcaccacacctcgagggaatcgaggatgaccaggtcgaccta
cgcagagaaattgcctacaatctctctctgatctaccagagcagcggcaacatggtcatg
gctcgccacctcatcagcacctactgcaccatctga
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