Polyodon spathula (Mississippi paddlefish): 121323586
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Entry
121323586 CDS
T07273
Name
(RefSeq) GPI inositol-deacylase-like isoform X1
KO
K05294
GPI inositol-deacylase [EC:3.-.-.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
pspa01100
Metabolic pathways
Module
pspa_M00983
GPI-anchor remodeling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
121323586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121323586
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Post-GPI attachment to proteins factors (PGAP)
121323586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PGAP1
PGAP1_3rd
PGAP1_TMD
PGAP1_2nd
Abhydrolase_6
Palm_thioest
DUF7379
DUF676
Abhydrolase_1
Lipase_3
Hydrolase_4
Motif
Other DBs
NCBI-GeneID:
121323586
NCBI-ProteinID:
XP_041120660
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Position
11:complement(4405913..4442755)
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AA seq
940 aa
AA seq
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MKLSAATFYALLAGLFAIAIRDVLFGYEENGCSMTYMFEYPEYQRIRLPKRLQRQYPSYG
LYLYGEGSYAEENKKLKLTGIPVLFLPGNAGSYKQARSLGSVALRKAENIDNRFHLNVFT
VDFNEELVALYGGSLQRQTKFVHECIRAILKLYKDQPAPPSSVAVVGHSMGGIVARALFT
LPKFGHRLISLIITQATPHQGPVLPLDSNLLDFYAMVNQRWSEHAQELRNVTVLSVGGGF
RDYQVRSGLTALPCPSDDPNKLSLVSTAVPRTWVSTDHLSIVWCKELVLATVRTFFDLVD
PDTKQIAEDPEKRMAVIRHHFVRHPVKIYDDTEDDVITFSVPSEVWTKVLAPRLSYTSPT
EPRTKYCMFPLSSHRKSYSHFHCRSNDLKMSSWLFGCTQSNGLACLQAVDLSWGTELLPA
FKVLTLKLDDYPSFSHIVVSASNTNAKQFSVDCEFFNEDSRIISTPVTHVLSFGVTVSEV
VLHPTGLIHNIQLQDFHQMHQAFTIRIESRCQTPQEGKHSVYRLRVPWFREDSFTTASGS
SVTQISARLHSPRPDNTSTTSLQLHTCPGCRYTVTIRTSVFQVLGQILRFHCSCLPVYIA
VSILLAYEGQLYSLLITGHTVELGKALSASAKPYRVVPVINILLYLLSVGWLQAGWSALS
LPPLDVPPLSEEGGDWSPLVSLLLFMFGSAIAYWGSALLGLALSLLSVPLSAIHRPSTSP
SSGKLGSRGQISLMVFLVVICRTTCGALALIITYLIYLYKVLRLQMSERTLKHVLNLGPR
QSPSRAAGPGVCVKEGGGGAVEAPGPQEPAVSCNSSGLVSVSMLEDTSEDLYLHLTLLTL
LTLPVLLSAPSFIYWTKNLRYSLRLDPDPCWPVAIVLVISAVLLMSSSTASIRTSKLLKV
SARLQLPVSIAMVAFALLHLYRVSHFIALTLSLHALSCLI
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtccgcggcgaccttctatgccttgctggccggcttgtttgcaatagcgatt
cgcgacgtgctttttggatacgaggagaacggctgtagcatgacctacatgttcgagtat
cccgaataccagagaatcagacttccgaagaggctgcagcgacagtacccgagctacggg
ctctacctctatggagaagggagctatgctgaggagaacaagaagctgaagctgactggg
atccctgtcctctttctgcctgggaacgctggcagctacaagcaggcccggtccctcggt
tctgtagccctccggaaagcagagaacatcgacaaccgcttccacctgaatgtctttacg
gtggacttcaacgaggagctggtggccttgtacgggggcagcctgcagagacagaccaag
ttcgtccatgagtgcatcagagccatcctcaaactgtacaaggatcagcctgcgccccct
agcagcgtggcggtggtaggacactccatgggcgggatcgtggcgcgggccctcttcacg
ctgcccaaattcggccatagactcatcagcctcattatcacccaggccacacctcaccag
ggacccgtcttgcccctggacagcaacctccttgatttctacgcgatggtgaaccagcgc
tggtctgagcacgctcaggagctgcgtaatgtgacggtgctgtcggtgggaggggggttc
cgtgactatcaggtgcgctccggactcaccgccctgccctgcccctcggacgaccccaac
aagctctccctcgtgagtacagctgtgccaaggacctgggtctccactgatcacctctct
attgtttggtgtaaggagctggtgctggctactgtccgaaccttcttcgacctcgtggac
cctgacaccaagcagatagcagaggacccagagaagagaatggctgtgatccggcatcat
tttgtcaggcaccctgtgaaaatctacgatgacacagaggacgatgtcatcacattctca
gtgccatcagaggtatggactaaggtcttggctcccaggctgtcttacacaagccctacg
gaacccagaacaaaatattgtatgtttcctctttcaagtcacagaaaatcctacagccat
ttccactgtcggagcaacgatctgaagatgagcagctggctgttcggctgcacacagagt
aacgggctggcatgcttgcaggcggtcgatctgtcttgggggactgagttactcccagcc
tttaaggttctgactctgaaactggacgattatccttccttctcccacattgttgtcagc
gcctcaaacacgaatgccaagcagttcagtgtagactgtgagtttttcaatgaagactct
cggatcatctccactcccgtgactcacgtcctgtctttcggtgtgactgtgagtgaggtg
gtgctgcacccaacaggcctcatccacaatattcagctacaggactttcaccagatgcat
caggcttttacaatccgaattgagagccgctgccagacaccgcaagaaggaaagcacagc
gtttacagactcagagtgccgtggtttcgtgaggattcattcacaacagcaagtggttca
tctgtgactcagatctctgccaggctgcattccccccggccagacaacacctccactacc
agcctgcagctccacacctgccctggctgccggtacacggttaccatacggacatctgtt
tttcaagtgcttggacagatacttcggttccactgctcctgcctgcctgtctacatcgct
gtcagtatcctcctggcgtacgagggccagctctactccctgctcatcacaggtcacact
gtggagctagggaaggctctgagtgcctctgctaaaccatacagagtagtgccggtcatc
aacatccttctgtatctcttgagtgtgggctggctccaggcaggctggtccgccctgtcc
ctgcctccgctggacgtgccccccctcagtgaggaggggggtgactggtccccgctggtg
tctctacttctcttcatgttcggctctgcaatcgcctactggggcagcgctctgctgggc
ctggcactgagcctgctgtccgtcccactgtcagctatccacagaccgtccacttctccg
agtagcggcaagctgggctcacgcggtcagataagtcttatggtcttcctggtggtcatc
tgcaggacaacctgtggagccctggccctgataatcacctatcttatctacctgtacaag
gttttgaggctgcagatgtcagagagaacactgaaacatgtgctcaacctgggcccgagg
cagtctccgagcagagccgcaggtccaggggtctgtgtgaaggagggaggtgggggggcg
gtggaggccccagggccccaggagccagcggtcagctgtaacagcagtggtctggtctct
gtctccatgttggaggacaccagcgaggacctgtacctgcacctgactctgctcaccctg
ctcaccctgcctgtgctgctgagtgcaccctccttcatctactggacgaagaacctcagg
tatagcctgcgcctcgaccctgacccctgctggccagtggccattgtcctggtcatttct
gcagtgctgcttatgagctccagcacagcttcaatacgaactagtaaactgttgaaggtc
agcgccaggctgcagcttcctgtgtctatcgccatggtggcattcgctctgctgcacctc
tacagagtgtctcacttcattgccctcaccctgagtctgcacgcactcagctgcttgata
tag
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