Polyodon spathula (Mississippi paddlefish): 121323628
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Entry
121323628 CDS
T07273
Symbol
ttll4
Name
(RefSeq) tubulin polyglutamylase TTLL4 isoform X1
KO
K16601
tubulin polyglutamylase TTLL4 [EC:
6.3.2.62
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121323628 (ttll4)
04812 Cytoskeleton proteins [BR:
pspa04812
]
121323628 (ttll4)
Enzymes [BR:
pspa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.62 beta-tubulin-glutamate ligase
121323628 (ttll4)
Cilium and associated proteins [BR:
pspa03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
121323628 (ttll4)
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
121323628 (ttll4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATPgrasp_ST
Motif
Other DBs
NCBI-GeneID:
121323628
NCBI-ProteinID:
XP_041120717
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All DBs
Position
11:26813452..26881875
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AA seq
1129 aa
AA seq
DB search
MASNGVEDVTLESDGTVRVDSFKPPRCFSPSTLQRRFKYLAPPRGPIQCGPGTRTNVRDF
QDRIRFFSGIPPQRAYLSVSTTANGASTSEAATRIALHSSVSLPFDSPCVLEQTIHSYRP
NWRLESFKFKSGILGKRAFSSPQPAVSPANPVSPHCPIPPKANSLEPLNKTETDMPFTQR
PTRTNKPAINTNTFMRPTSAKVPSYHKLDSNTVQTYLTASHCNGDKGDSKIENRATKLNG
PMLFLKTSPSTLSREKRKDMILEEISWQAHTSEGCATPLRAERMTCKSEGNISHRLEKAG
NVNSEIMLTKAVRRMSGNSSAKNRMWNGFCRQPQGHEGHSEDSQLSHSNERKATESPQGE
CISQSSVKTSNSRHINGDSDGSHMQMQAVESSNIIKAHIFSNLSDAVVTKGNVDAMQQKR
APQKTDSSQMASVSLVTTQISAIQLNKETKSHKSGDERVDMEMKELGADYDEMQQDLDED
GDEEELPDALEEDDNSQDDDESDCSSVTEESSASSVVVYRSFMEDSSQVCSNDSRVLKPA
LVPSLFSTKPPTIYFSTPDEKVELLPLKQRKLLRWKMSSVTPNVVRHTIARSHFKVTKRN
HDWLGCWGHHMKSPGFKAIQEHQKLNHFPGSFQIGRKDRLWRNLSKMQARFGKKEFNFFP
QSYVLPQDIKLLKKSWEEAGSKQKWIVKPPASARGIGIQVIHKWNQLPRRRPLLVQKYLN
KPYLINGCKFDLRIYVYVTSYDPLRIYMFTDGLVRFASCKYSTSMKSLSNKFMHLTNYSV
NKKNSEYKPNSDEKACQGHKWALKALWNYLSQKGVSTNAIWEKIKDIVIKTIIASDPYVN
SLLKMHVRRPYCCHELFGFDIMLDESLKPWILEVNISPSLHSNSALDVAIKGQMISDLLN
LAGFVLPLKGDVTGSRVNSSTSSMSGQMKERTRYTAELSSDEKVKRAYFLSQRFADQEFY
SSILEVLTVEDVRVLSDTEDEFCRRGEFERVYPSFSSSRYLRFFEQPRYLNILLNQWEQK
YYLNKVRGIELLRNLCQKGVQLGTTCDPAHVWSKSHSIQKPEAPVNGSIKQETVTVSTSV
KRKKCDELTGDFEQISSNRSLPTIGELGTNDYLLLPPTPNSLHDITQAL
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggcctctaatggagttgaagacgtgacgcttgagtccgatggcactgtcagagtagat
tcttttaaacctcccagatgtttctctccgagcacactgcagaggagatttaagtacttg
gctccacctcgggggcccatacaatgtggtcctggaactcggactaatgtgagggatttt
caggaccggatccgttttttctcagggattcctccacagcgtgcctacctctcagtcagc
accacagcaaatggtgctagcacctcagaagctgcgaccaggattgccctccattccagt
gtctctttgcctttcgatagtccttgcgttctcgaacagactatccacagctacaggcct
aactggcgactcgaatccttcaagtttaagtctggaattttggggaagagagccttctca
tcgccccaaccagcagtttctccagccaatcccgtttcccctcattgccccatcccccct
aaggcaaattcacttgagcccttgaacaaaactgaaactgacatgccatttactcagcga
cctactcggaccaacaagcctgcaataaacacaaatacatttatgagacccaccagtgca
aaagtgccttcctaccacaaacttgattctaacactgtacagacatatttgactgcctct
cattgtaatggggataaaggagacagtaaaattgaaaaccgagccacaaagttgaatggc
cctatgctgtttctgaaaactagcccttctactttgagtcgagaaaaaagaaaggatatg
atcctggaggaaatctcctggcaagcacacacttctgaaggctgtgcaacacctctgagg
gctgagagaatgacctgcaagtctgagggcaatatcagtcacaggttggagaaggctgga
aatgtcaactccgagatcatgttgacaaaggctgtgagaagaatgtctgggaacagctca
gcgaagaacagaatgtggaatgggttctgcaggcagccgcaagggcatgaggggcactct
gaggattctcagttgtcacacagtaacgagagaaaggcaacggagtcccctcagggagaa
tgcatctcacagtcatcagtgaaaaccagcaattctcgccatatcaatggcgactctgat
ggcagccatatgcagatgcaagcagtggagagttcgaacatcattaaagcacacattttc
agtaacctttctgatgctgtggtgaccaaagggaatgttgatgctatgcagcagaagaga
gcgccccagaaaacagattcttcccaaatggcgtctgtttcattagtgaccacacagatc
tctgcaatacagttaaacaaggaaaccaagtcacataagagcggagatgagcgagttgac
atggagatgaaagagcttggagctgactatgatgaaatgcaacaggacctcgatgaagac
ggagatgaggaggagcttccagatgcattggaagaggatgacaatagccaggatgatgat
gagtcagattgctcttctgtgacagaggagtcctcggcttcatctgtggttgtttatagg
agcttcatggaagattcctcccaggtttgctcaaatgacagcagggttttgaagcctgca
ttggtgccaagtttattctccacaaagcctcctaccatctactttagcactcctgatgaa
aaagtggagttgctacctttgaaacagagaaagctgctaagatggaagatgagctcagtg
actcctaatgtggtgaggcacaccatagcacgttctcactttaaagtcactaaaagaaac
catgactggctgggctgctggggacaccacatgaaatcaccgggatttaaggccatccag
gaacatcagaagctaaatcacttcccaggctccttccagattggacggaaagatcgtcta
tggcgtaacctctccaaaatgcaggctcgctttgggaaaaaggaatttaatttctttccg
caatcgtatgtgctgccacaagacataaagctgctgaagaagtcctgggaagaagctgga
agcaaacagaaatggattgtaaaaccgccagcatcagccagaggaatcgggatccaggtt
attcacaagtggaaccagctgccaaggaggagacctcttctcgtgcaaaaatatcttaat
aaaccctacctcatcaatggatgcaaatttgacctcaggatatatgtttacgtcacatct
tatgatcctcttcgaatctacatgtttacagatggcttggtccgttttgccagttgcaag
tactccacttcaatgaaaagcctgagcaacaagtttatgcacttaaccaattacagtgtg
aataagaagaattcagagtacaaaccaaacagtgatgagaaagcctgtcagggtcacaaa
tgggctttgaaagcactgtggaattatctcagccaaaagggagtcagcacaaatgcgata
tgggagaaaataaaggacattgtgattaaaaccatcattgcgtcagacccatacgtgaac
agcctgttgaagatgcatgtgcgccgcccctactgctgccacgaactctttgggtttgac
attatgttggatgaaagtcttaaaccttggatcctggaggtcaacatctcacccagcctc
cactccaactctgctttggatgttgccattaagggacagatgatcagcgacctattgaac
ctggcagggttcgttctgcctctcaaaggagacgtgactggcagtcgtgtcaacagctca
acaagcagtatgtctggacaaatgaaagagaggacaagatacactgcagagctttcctcc
gatgagaaagtgaaacgggcttacttcttgagtcagaggtttgcagatcaggaattctat
tccagtattcttgaagttttgactgtggaagatgttcgggttttgtcagacacagaagat
gagttttgccggcgaggagagtttgagcgagtgtatccttcatttagctcctcgcgctat
ctccgattctttgagcagccacgatatctgaatattctcttgaaccagtgggagcagaaa
tactatcttaacaaagtgagaggtattgaactgcttaggaatctttgtcagaaaggagtc
caactcggaaccacgtgtgaccctgcgcatgtatggtcaaaatctcattctatccagaag
cctgaagctccagtaaatggaagtatcaaacaagagactgttacagtcagtacatctgtt
aaaaggaaaaaatgtgacgagctgacgggggactttgagcaaatatcttccaatcggagc
cttccaacgattggagagttggggaccaatgattacttacttttaccaccaactcccaac
agcctccatgacattacccaggccttgtaa
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