Polyodon spathula (Mississippi paddlefish): 121323633
Help
Entry
121323633 CDS
T07273
Name
(RefSeq) TRAF family member-associated NF-kappa-B activator-like
KO
K12650
TRAF family member-associated NF-kappa-B activator
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04140
Autophagy - animal
pspa04621
NOD-like receptor signaling pathway
pspa04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121323633
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121323633
04622 RIG-I-like receptor signaling pathway
121323633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBD
MPS2
Motif
Other DBs
NCBI-GeneID:
121323633
NCBI-ProteinID:
XP_041120731
LinkDB
All DBs
Position
11:11329838..11345444
Genome browser
AA seq
388 aa
AA seq
DB search
MERKMGDQLNKAYEAYRQACIEKESAKKELLQKTEAYERHISELKLQLEEQNKLIAELRA
QQSSAGSSSRGNVKGSENILEGKEAVLQTHRKNECQSLLAYGQLHKNQAVTSHSENLAMA
NLNIAESAQRKSVPYPGSGIAIDERKEVIEAFNEIRGTLQIIRNTTRKQKDHLNKLRIKN
EAANEGQFSMPIQCTDVTVEQGALKPTKKTNDNKEVSSASITSRGVSPEDEDCLDSFSNL
SVKFPPADTEYDFLNSAPEKPVALSTGRTFTAFTKDSDEVTQPEHAPNCRRIDWDRQAPG
SDINHSNMAKPLASSTTLDTFPPETVRGPQQPFWSPHNSEDCADPEQNANPSRCEFCQAI
LPAGIASNRDEFLRHLNSHFKDPASNGS
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggagagaaaaatgggggatcagctcaacaaagcgtatgaagcctatcgtcaagcatgc
attgaaaaagaaagtgcaaagaaggaacttctacaaaagacggaagcttatgaacgccat
atcagtgagctgaagctgcagttagaggagcaaaacaaactcattgcagaacttagagcc
caacagagttctgcaggaagttcctccagaggcaatgtgaaaggctcagagaatatactt
gaaggcaaggaggctgtcctgcagacacacagaaaaaatgaatgtcagtccttattagct
tatggtcaactccataaaaaccaagcagtcacatcacacagtgagaatctggcaatggca
aatttgaatattgctgaatcagcacagaggaaaagtgttccttatccagggtctggaata
gctattgatgaaaggaaagaagtcattgaggctttcaatgagatccgtggtacattacag
atcattcggaatacaacaagaaaacagaaggatcacttaaataagctgaggataaaaaat
gaggcagcaaatgaaggtcaattttcaatgcctatacaatgcactgatgtcacagttgaa
caaggggccctcaaacccacaaaaaagactaacgacaataaagaagttagctctgcttct
ataacatcccgaggagtcagcccagaagatgaagattgcttggactccttttctaatctc
agtgtgaagtttccacctgcagacactgaatatgactttttaaatagtgcaccagaaaaa
ccagtagctctttcaactggaagaactttcacagcttttacaaaggacagtgatgaagtt
acccagcctgaacatgctcccaactgcagaagaatcgactgggaccgacaggctcctggt
tcagatattaaccactcgaacatggcaaagcctcttgcttcctctactactttagatact
tttccacctgagactgtacgaggaccacaacagcccttctggagccctcacaacagtgaa
gactgtgctgatcctgaacaaaatgcaaaccccagtaggtgtgagttctgccaagccatc
ctgccagcaggaatcgcatccaaccgggatgaatttcttaggcatcttaattcacacttt
aaagatccagctagcaatggttcctaa
DBGET
integrated database retrieval system
