Polyodon spathula (Mississippi paddlefish): 121323661
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Entry
121323661 CDS
T07273
Name
(RefSeq) carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like
KO
K15731
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:
3.1.3.16
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121323661
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121323661
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
121323661
Protein phosphatases and associated proteins [BR:
pspa01009
]
HAD phosphatases
Fcp/Scp phosphatases
121323661
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
121323661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
JUPITER
DUF4171
Motif
Other DBs
NCBI-GeneID:
121323661
NCBI-ProteinID:
XP_041120786
LinkDB
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Position
11:complement(19942327..19962283)
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AA seq
272 aa
AA seq
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MDNHSTSIITQVSRDEEVNTHLQEKGAQSPASSSSSSSKKKRKNKPQSRGLFHSLFCCFC
PDESEHIPDNSKPPLLVEENGSVSKAVKPLLPQVKSQDVGKICVLIDLDETLVHSSFKPV
NNADFIIPVEIDGTVHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVSDLLDKW
GTFRSRLFRESCVFHRGNYVKDLSRLGRDLKKSIIIDNSPASYIFHPDNAVPVVSWFDDM
SDTELLDLIPFFERLSKVDDVYTVLKQQRTIS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggacaatcactccacgtccataatcactcaggttagcagagatgaagaggtgaatacc
catttgcaagaaaaaggtgcacagagtccggcctcctcctcctcctcctcctcgaagaag
aagaggaagaataagccacaaagcagaggtcttttccacagcctgttctgctgtttctgc
cctgatgaatcggagcacataccagacaacagcaaaccacccctcctggtggaggaaaat
ggaagtgtctcaaaagcagtgaaacccctccttccccaagtaaaaagtcaagatgtgggg
aagatctgtgtgctaattgacctcgatgaaacgctagttcacagttcatttaagccagtg
aacaatgctgattttatcattcctgttgaaattgatgggacagttcatcaggtgtatgta
ttaaagcgccctcatgtggacgaatttctacagcgcatgggtgagctcttcgagtgtgtg
ctgttcactgccagtttagccaagtatgcagatccggtatccgatttgctggataagtgg
ggcacattccgtagccggttgttccgggagtcatgtgtgttccaccgcggcaactacgtc
aaggacctgagccgcctggggcgcgatctcaagaagagcatcatcatagacaattcccca
gcctcctacatcttccaccccgacaacgccgtgcctgttgtttcctggtttgatgacatg
tccgacacagagctgctcgacctcatccctttctttgaaagactgagtaaagtggatgac
gtctacacagtacttaaacagcagcggactataagttag
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