Polyodon spathula (Mississippi paddlefish): 121323676
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Entry
121323676 CDS
T07273
Name
(RefSeq) homeobox protein Hox-D9-like
KO
K09294
homeobox protein HoxB/C/D9
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121323676
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
121323676
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hox9_act
Homeodomain
HTH_65
Homeobox_KN
GerE
Motif
Other DBs
NCBI-GeneID:
121323676
NCBI-ProteinID:
XP_041120802
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All DBs
Position
11:13843779..13850774
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AA seq
267 aa
AA seq
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MSTSGTLSNYYVDAIIGHEVEDVYGARFAQGAHSTTSRPSGVGDSPDFSSCSFAPKSAVF
SSSWSPVHPQSSAAVSGIYHPYMHQSHLAAAESRYVRSWIEPLSTSVSFSGFHPNSRHYG
IKPETLPSSKRTECSSFEAQAPSIPDFTSASFSESKDKPAKAKEPFSNDISRNSELKEET
QQQLDPSNPAANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTE
RQVKIWFQNRRMKMKKMNREKGNKDLN
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccagtggcacacttagtaattattatgttgatgctatcatagggcacgaagta
gaggacgtttatggagcgaggttcgcacaaggagcacacagcacgacctcaaggccatca
ggtgtgggagatagtccggatttttcctcttgtagctttgcacccaaatcggcggtgttt
tcttcgtcttggtcccccgtccaccctcagtctagtgccgcagtgtcggggatctatcat
ccttacatgcaccagtcacatcttgccgcagcagaaagtagatatgtacgttcctggata
gagccactctccacttcggtttctttttccggcttccacccgaacagtcggcattacggg
atcaagccagaaactttgccatcatccaagaggacagagtgctcttcttttgaggcacag
gctccaagcatccccgacttcacgagcgcttctttttcagaaagtaaggacaaaccagct
aaagcgaaagaaccttttagcaacgacatttccagaaacagcgagctcaaagaggaaact
caacagcaacttgacccaagcaatcctgctgcaaactggatccacgctcgctcgacaagg
aagaaacgctgcccttataccaaataccagaccctggaactggaaaaagaatttcttttt
aacatgtatctcacgagagatcggcgttacgaggttgctagaattttaaatttaaccgaa
agacaagtaaaaatctggtttcagaacagaagaatgaaaatgaaaaaaatgaacagagag
aaaggcaacaaggatcttaactga
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