Polyodon spathula (Mississippi paddlefish): 121323820
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Entry
121323820 CDS
T07273
Name
(RefSeq) stromal interaction molecule 2-like
KO
K18196
stromal interaction molecule 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121323820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121323820
Transporters [BR:
pspa02000
]
Other transporters
Pores ion channels [TC:
1
]
121323820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOAR
SAM_2
SAM_1
DUF7365
DUF4446
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
121323820
NCBI-ProteinID:
XP_041120996
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All DBs
Position
1:87580452..87663029
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AA seq
700 aa
AA seq
DB search
MIYFTQPIALVLHGLLISAVLGSEVYSKDQAKRASSDNTALPTDPCLTVTPQCINEADRL
SLEALRHIHKQLDDDNDGGIEVNESVEFIIEDMKQQQTNKHSHLHREDQHITLEELWKCW
KSSQVHNWTLEETVQWVVESVELPQYETNFRDYKVNGNTLPRIAANEPAFMTSQLKILDQ
RHKQKLNLKALDAVLFGPPLRPSHNWVKDFVLMVSIIIGVGGCWFAYVQNKSSKEHISKM
MKDLESLQSAEQSLQELQQRLEKAQEENRTVAVEKQNLEQKMKDEISDAKREAHRLRALR
EGAESELSQLKYAEEELVQVRMALLKAEKEFEKHGDWSVAEALQKWLQLTHEVEVQYYNI
KKQNAELQLSIAKEEAEKIKKKRSSVFGTLHVAHSSSLDEVDHKIIEAKKALSEVTACLR
ERLHRWQQIEKLCGFPIVHNSGLPTLTATLYSEHSWVVMPRVSIPPYPIAGGVDDLDEDT
PPIIPQFSTPLMKVGSLRSSSQCHSRRSIKSSLAQPQPVMLSSDPDLLLMASCPPAYRTE
EEEDAISFSAEKKWDRQDAWSDSNYLGRKQFASTVQEVPSQKTSRDELFDQELSFTDSPT
SFDQSKGSTDSVGVIESKSMVYSPASKVVYNGILEKSYSLGQLTSGLPVSETCYPSLTSL
NIESRVAKEQKINSMSQDSCDDVDKNKKTSKLKSLFKKKK
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgatttacttcactcagccaatagctctggtgctacatggactcctcatttctgcagta
cttggatcggaggtttattctaaagaccaggcaaaacgagcctcgtctgacaatacagcc
cttcctacagatccctgcctcacagtgacaccacagtgcatcaacgaagcagacaggttg
agtttggaagcacttcgccatatccacaagcaacttgatgatgacaacgatggcgggatt
gaagtaaatgaaagtgttgagttcataattgaagatatgaaacagcaacaaaccaacaaa
cacagtcatttacacagggaagatcagcacatcactttagaggaattgtggaaatgctgg
aaatcttcacaagtacacaactggacattggaagaaacagtgcagtgggtggttgagtct
gttgaacttcctcagtacgagaccaattttagggattataaagtcaacggtaacaccctg
ccacggattgctgctaatgaacctgcattcatgacgtcccagttgaaaattttggatcag
cgccacaagcagaaactaaatctcaaagccctggatgctgtgttatttgggccgcctctt
cgtccttcccacaactgggtgaaggattttgtcctgatggtttctattattattggtgtt
ggaggctgctggtttgcttatgttcaaaataaatcctctaaggaacacatttcaaaaatg
atgaaagatttagaaagcctccaaagcgcagagcagagccttcaagagctacagcaacga
cttgaaaaagcccaggaggaaaatcgaacagttgctgtggagaagcaaaatctagagcaa
aagatgaaagatgagattagcgatgccaagagggaagcgcatcggctgcgggccctgagg
gagggggcagagagtgagctgagccagctcaagtatgcagaagaggagctggttcaggtc
cgtatggcactattgaaggcagagaaagagtttgaaaagcatggggattggtcagtggct
gaggctttgcagaagtggctccagctgacacatgaggtggaggtgcagtactataatatc
aagaaacagaatgctgagctgcagttatccattgccaaggaagaggcagagaagataaaa
aagaagaggagttctgtctttgggacacttcatgtagcccatagctcatctctggatgag
gttgaccacaaaattattgaagcaaagaaagcgctgtctgaggtaacagcttgcttgcgt
gagcgtctacatcgctggcagcagattgagaagctctgtggctttcctatagttcacaac
tcagggttacccaccctgacagccacactctactcagaacacagctgggtagtcatgcca
agagtctccattccaccataccctattgctggtggagtagatgacttagacgaagacact
cctccaatcattccacagttttccactccactaatgaaggtgggctcattaagaagcagt
agccagtgccactcacggcgcagcataaagagttcacttgcacagccccagcctgtcatg
ctctcctcagatcctgatcttttgttaatggccagctgtcctccagcttatcgcacagag
gaggaagaggatgctatcagctttagtgcagagaaaaaatgggacagacaggatgcatgg
tcagatagcaattatttaggaagaaaacagtttgcaagcacagttcaggaagttccttct
caaaaaacctccagggatgagctgtttgatcaagaactgagttttacagattcaccgaca
tcctttgatcagtccaaaggttccactgactctgtgggtgtcattgaatccaaaagcatg
gtctacagccctgccagcaaggtggtctataatggcatcttggagaagtcttacagtttg
ggccagctgaccagtgggctgcctgtctcagaaacctgctacccttctcttacttcactg
aacattgagagcagagtagcaaaggaacagaagataaatagtatgtcccaagactcctgt
gatgatgttgacaagaataagaagacatccaagttaaaaagcttatttaaaaagaaaaag
taa
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