Polyodon spathula (Mississippi paddlefish): 121323840
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Entry
121323840 CDS
T07273
Name
(RefSeq) vesicle transport protein SEC20-like isoform X1
KO
K08497
protein transport protein SEC20
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121323840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121323840
Membrane trafficking [BR:
pspa04131
]
SNARE
SNAP-25[N] (Qb)
Sec20
121323840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec20
Med9
CCDC84
Ribosomal_S15
MerR-DNA-bind
Motif
Other DBs
NCBI-GeneID:
121323840
NCBI-ProteinID:
XP_041121048
LinkDB
All DBs
Position
12:32201451..32206438
Genome browser
AA seq
229 aa
AA seq
DB search
MAASQDVHVRICSQEIIKFDLEIKALIQDIRDCPGPYRELAELNSNVKEKINQLRMRIQD
LEQMAKEQDKESDKLALLNEMESHRKQMLSNQTAWRKANLSCKLAIDNSEKDDLLQDEDS
SARQRKTTKQSMAQTSSAITESLMSISRMMSQQVHQSEETVTTLATSSRTVLETNEEFKA
MTGTIQLGRKLITKYNRREFTDKLLIFLALALFLATVVYILKKRLFPFL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggccgcttcccaagatgtccacgtccgaatctgtagccaagaaataataaaattcgat
cttgaaataaaagcccttattcaggatatacgagactgtcctggaccctaccgtgagctc
gcagaattaaattcaaacgtgaaagaaaaaattaatcagctcagaatgagaatacaggat
ctggagcaaatggctaaagaacaggataaagaatctgataagttggcgctattaaatgaa
atggagagtcatcgaaaacagatgctaagtaatcagacagcatggaggaaggcaaacctg
tcctgcaaacttgctattgataactcagaaaaggatgatcttctgcaagatgaggattct
tctgcaaggcaaagaaaaacaacgaaacagagcatggctcaaacttccagtgctataact
gagagtctaatgagtataagcaggatgatgtcacagcaggtccatcagagtgaagaaacc
gtgacaacgctagccacttcgtccaggacagtgctggaaacgaatgaggagtttaaagca
atgactggaacaatacagttgggacgaaagctcatcacaaaatacaaccgaagggagttc
acagacaagctgctgatcttcctagctttagctctctttctggccacagttgtgtatata
ttgaagaaaaggctcttcccattcctatag
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