Polyodon spathula (Mississippi paddlefish): 121323906
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Entry
121323906 CDS
T07273
Name
(RefSeq) latent-transforming growth factor beta-binding protein 2-like isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121323906
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
121323906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
FXa_inhibition
EGF_3
EGF
hEGF
EGF_TEN
Plasmod_Pvs28
EGF_2
Motif
Other DBs
NCBI-GeneID:
121323906
NCBI-ProteinID:
XP_041121166
LinkDB
All DBs
Position
12:complement(5069569..5163542)
Genome browser
AA seq
2098 aa
AA seq
DB search
MFVLRMDRLRIFVLMVLVAMLIGLCDSQRDSGRRLESTGTRGTWSQSRARSQGNNYSARV
HGLYRTNGPVTARVFNPSHSHTNGSHSGRANHPAAALLSKQENKPAVPVKSIVPTAPPVK
DALPQKNGSTIAREAIPASLKQRVVAHSSRFRTRQIARQNPANNGDSKQKIAAPSRPVGP
NVCGGRCCTGWAIAPGTNRCIKPDCNPPCQNRGSCSRPQTCVCRSGFQGFRCEERAPEQV
YVLDGSSRVYQPVRPATPLSDRRKTGNTQKRNDTGSQTESATQASRQRPVSTGQGPSTTH
DRRGQAGSSSQHTGASRTVKRYPSSTGQITSNALPNGNHNQPASGLGTGNLNNAVEPRGA
NLTANIDRIKIVFTPMICKRSCNNGQCYNSCEKGDTTTVYSENTQSHISKAGFRIYFCQI
PCMNGGRCIGRDQCWCPSNSTGKFCHLPAPHPEKQHAGKGSSHTASNSSHSMYTLPLSNQ
LASIYPSLVNVHIQHPPEAGVEVHQVAHVKPGQVPPRTQENSVEEQQPVLSVQQMSQLAN
GNGHSEDHSHTNGNSIGNENGHSRPQNRLNGYIGRCFQETIDGQCGKPLPGLTKQDDCCG
SIGASWGLNRCTQCPSKPAYPVIANGLVECPKGYKRMNQTHCQDINECLMPGICKNAECL
NSRGSYRCTCKPGHMLDTSRSHCISDKAVSMEREMCFRSLSGSSCSLPLTQHITKQICCC
SRVGKAWGKDCQRCPLPDTDHFKEICPAGHGYTYSRSDIQILMRQAKEEELAAGSDTRQH
HHHTHDNGHETPRVPKKEQGGIGQTKIPPVVTEATLKYPVVKTTPDSPIHLDPEPASRDT
APINVATQVTEIDRCSATPTVCGPGACISVQGGYTCYCNPGYELNTLQTRCVDVDECEKD
PCEGKGRCVNNAGSFSCYCHPGYSLVITQNKKTCQDINECDLPNICPGSSCINTAGSFSC
DCENGYIKSRRGPCEDVDECRNPSACPSGRCVNTPGSFQCVSCGTGYKAVNGRCIDENEC
RVPGVCTNGRCINLEGSYRCSCSQGYETSSDGKSCKDINECATHNVCPNGLCTNTEGSYT
CSNCRPGYRISSDGERCEDINECGSTNVCPNGVCTNTEGSFTCSKCRNGYRLSEDKQRCE
DINECASPSMCPSGLCANMEGSYSCTACPSGYRVSADRQNCEDINECLSPDVCPSGICIN
TEGSFSCTNCRAGYRIAVDGRRCEDIDECALPDVCPNGVCRNNEGSYSCTICGTGYRTAA
DRSSCEDIDECALPDVCPNGLCRNNEGSFSCTNCRPGFRVSANGRSCEDIDECALPEVCH
NGHCVNNEGSYSCTTCGTGYKITADGFSCEDVNECSSPEICPSRVCVNTVGSFSCMACDS
GYTVSDDRSKCEDINECEDISRSCLGGECTNTPGSFICACRQGFKLIGGTVCIDVNECLT
LDICGSNGECMNSEGSYFCVCSSGYATTAHGVGCQDVDECREGSVCSRGQCLNSDGSYQC
LCEAGFEYSQETRDCEDKDECKEYGSSVCGSWHCENTLGSYRCFKGCQPGFNTGPDGECD
IDECINETICGSHGFCENTDGSYTCLCDRGFENPPGTPGCVDINECEVITAVCGTAFCEN
VEGTFLCICSGDDEEFDPETSQCRSRALIGYGSVVDTPVVAASSGERKECYYNLDDANFC
ENVLSRNTTKQECCCTVGSGWGDDCEIHPCPITGGDEYNELCPQGNGFLSMEGTSFGFGQ
LIYKDADECVMFGSEICKNGLCANIEPGYSCYCRVGYYYDTIRLECVDHNECQEEDTCVD
GECVNTPGSFNCFCSPPLVLDVTRRRCINANFTSDDLDSEEDIHLDICWEEVSSEYMCSR
PLTSRRTTYTECCCLYGVAWSNDCAFCPMRSSADYAALCNLPRTDGLGADGLRDRPGYEY
GPDGPLYGPGYLDLGNSPYYNNPGPEYGPQDPVPLTPFRNPSNEYEFRGSPPLRTNQPQD
FQPQFVNPYADRFDGFEGLQAEECGILNGCENGRCVRVREGYTCDCFDGFELDLNKMLCI
DINECKDISEQNSLCKNGRCVNTEGSYKCVCLPGFLASPQPDHCIPEEPKAHSMEAEQ
NT seq
6297 nt
NT seq
+upstream
nt +downstream
nt
atgttcgttttaagaatggatagattgaggattttcgttctaatggtgttagtcgcaatg
ctgattggactctgtgactctcaaagggattctggaagaagactcgagagcacaggtaca
cgaggtacctggagccagtcgcgagccaggagtcagggcaataattactcagctagagtg
catggtctgtatcgcacgaatggtcctgttacagcccgtgtatttaacccttcacattct
cataccaacggttctcattcgggacgggcaaatcacccagcagcagccctgctgtcaaag
caagaaaataaacctgcagtcccagtgaaaagcatcgtccctacggcaccgccagtaaag
gatgctttaccccagaagaatggctctaccatagcccgggaggcaatcccagcatcactg
aaacagcgagtggtggctcattcctccaggttcagaaccaggcagattgccaggcagaac
cctgctaacaacggagactccaaacagaagattgcagcacctagccgtcccgtgggaccc
aatgtgtgtggaggacgttgctgcacgggatgggccatagctcccggcacgaatcgatgc
ataaaacctgattgcaacccaccttgccagaacaggggctcctgcagccgaccccagacc
tgtgtttgtcgctctgggttccagggcttcaggtgtgaagagagggcccccgagcaggtg
tatgtcctagatggctcatccagggtctatcagcctgtccgtcccgctacacccttatca
gacaggagaaaaacaggaaatacccagaaaaggaacgacacagggagtcaaactgaaagc
gctacccaggcttctagacaacgacctgtgtccacaggccaagggccttccacaacacac
gacagaagagggcaggctgggtcctcttcacaacacactggggcttcccgcacagtcaag
cgttacccatcatctactggacagatcacctccaacgctctgcctaatggcaaccacaat
cagccagccagtggacttggaactgggaaccttaataatgccgtggaaccaagaggagca
aacctgacggccaacattgaccgtataaagattgtcttcaccccgatgatctgcaagagg
agctgtaacaatggtcagtgctacaacagttgtgagaaaggggacactacgaccgtttac
agcgaaaacacccagagccacatctcaaaagcaggatttcgcatctatttctgccagatt
ccctgcatgaacggggggcgctgcatcggacgagaccagtgctggtgcccatcgaactcc
acagggaaattctgtcaccttccggcgccacatccagagaaacaacatgcaggcaagggg
agcagtcacactgcgagcaattcatcacattccatgtataccctgccgctgtctaaccag
ctagcctccatttacccttccctggtaaatgttcacattcaacaccctcctgaagcgggg
gtggaggtccaccaggtggcccacgtgaagccgggtcaggttcctcccagaacgcaagag
aacagcgttgaggaacagcagcctgtgctctcagtgcagcagatgtcccagctagctaat
gggaacggacactccgaagatcacagccacaccaatgggaacagcattgggaatgaaaat
gggcactccagaccgcagaacagactcaacggatacataggaagatgtttccaggaaacc
attgatgggcagtgtggtaaaccccttcctggactgaccaagcaagacgattgctgtggc
agtattggagcatcatggggactgaacaggtgtacgcaatgcccttcaaaaccagcttat
ccagtgattgcaaatggcttggttgaatgtccaaagggctacaagaggatgaaccaaact
cactgtcaagatatcaacgaatgtctcatgcctggcatctgcaagaacgcagagtgtctg
aactcccgaggcagctacagatgtacctgcaaacctggacacatgctggacacctcccgt
agccactgcatctcggacaaggctgtgtccatggagcgggaaatgtgcttccgttcgctc
tctggaagctcctgctccctgcctctcacccagcacatcaccaaacagatctgctgctgc
agccgcgttggcaaagcgtggggcaaggactgccagaggtgcccgctgcctgacacagat
cattttaaagagatctgccccgctggtcatggctacacatactccaggtcagatattcag
atcttgatgaggcaggcaaaggaggaggaattagcagcgggctccgatactcgccagcac
caccaccatacccatgacaacggccatgagacacccagggtacccaaaaaggagcaagga
gggattggccaaaccaaaatacctcctgttgtaactgaagccactctcaaatatccagtg
gtgaagacaaccccagattctcccatccacctggaccctgagcctgcctcccgggacacg
gcccccatcaatgtagcgacccaggtcacagaaatcgaccggtgttcagctacacccact
gtctgtggtccaggtgcctgtatcagtgtgcagggtggatacacctgctactgtaaccct
ggctatgagctcaatacactgcagacccgctgcgtggatgtcgatgagtgtgagaaggac
ccctgcgaaggaaagggacgctgtgtgaacaatgctgggtcctttagctgctactgtcac
cctggatacagcctggtcatcacacagaacaagaagacatgccaagatattaatgaatgt
gacttgcccaatatttgccccggaagcagttgcatcaacacggcaggttctttcagctgt
gactgtgaaaacggctatatcaaatcaaggagggggccgtgcgaagacgtcgacgaatgc
cgaaaccccagcgcctgtcccagtggaagatgtgttaacacccccggctccttccagtgt
gtgagctgtgggactgggtacaaggctgtgaacgggagatgtatagatgaaaacgaatgc
cgtgtccctggagtctgtacgaatggaaggtgtatcaatctggagggctcctataggtgt
agctgcagccagggatatgaaacatcttcggatggcaagagctgcaaagatatcaatgag
tgtgccacacacaatgtatgccccaatggactgtgtaccaacactgaaggttcctacaca
tgttctaactgtagacctggttacaggatatcttcagatggggagagatgtgaagatata
aatgagtgtggctcaacgaatgtgtgtccaaatggagtctgcacaaatactgagggctct
ttcacctgctccaagtgcaggaatgggtacagactttctgaggacaagcagagatgtgaa
gacatcaatgagtgtgcgtcacccagcatgtgccccagtggattgtgtgccaacatggaa
ggttcctactcctgcactgcttgtccttccgggtacagggtatctgcagacaggcaaaac
tgcgaagatatcaatgaatgcttatcccctgatgtgtgcccctctggaatctgcatcaac
actgaaggttctttctcctgcactaactgcagagctgggtacaggatagctgtagatgga
cgtagatgtgaagatatcgatgagtgtgctttgcctgacgtgtgccctaatggggtctgt
cggaataatgaggggtcgtactcctgtacgatctgtgggactgggtacaggacagctgca
gacaggagtagctgtgaagacattgatgagtgtgcattgccagatgtttgtcccaatggg
ctttgcaggaataatgaaggatccttttcttgcacaaactgtagacctggtttcagggta
tctgcaaatgggcgttcatgtgaagatatcgatgagtgtgctttgccagaagtgtgtcac
aatgggcactgtgtgaacaatgaaggttcgtactcctgcacaacctgtgggactgggtac
aagatcactgctgatggcttcagctgtgaagatgttaacgagtgctcatctccagagatc
tgtcccagcagagtctgcgtaaacactgtggggtccttctcctgcatggcctgtgatagt
ggctacacagtgtctgatgacagaagcaagtgtgaagatataaatgaatgcgaggatatc
agccgcagctgtttgggtggagaatgcacaaacactcccggatccttcatctgcgcttgt
cgccaaggcttcaagctcatcggaggaaccgtttgcattgatgtaaacgagtgcctgact
ttggatatctgtggctccaatggcgagtgtatgaatagcgagggctcctatttctgtgtc
tgctcttcagggtacgccaccacagctcatggagttggctgtcaagatgttgatgagtgc
agagaggggagcgtgtgttccagagggcagtgtttgaactctgatgggtcctatcagtgc
ctctgtgaagccggatttgaatattcgcaggaaaccagagactgcgaagataaggacgag
tgtaaagagtatggaagcagtgtctgtggcagctggcactgtgagaacacactgggctca
taccgctgcttcaagggctgccagcctgggttcaacactggaccagatggagagtgtgac
attgatgagtgcattaatgagaccatctgtggcagccacggtttctgtgagaacacggat
ggctcgtacacgtgcctctgtgacaggggcttcgaaaacccacctgggactccaggatgt
gttgacatcaatgagtgtgaggtgatcacagcggtgtgcgggactgctttctgtgagaac
gtggagggcaccttcctgtgtatctgctccggcgatgatgaggaattcgacccagagacc
agccaatgccggagcagggcgctgattggatatgggagcgtagtggacacaccagtggtg
gctgcctctagcggagagaggaaggagtgttattacaacctggacgatgccaatttctgc
gagaacgtgctgtcccggaacaccaccaagcaggagtgctgctgtactgtgggctccggc
tggggggacgactgtgagatccacccctgcccaatcactgggggagatgaatacaatgag
ctctgcccacaagggaatggattcttatcaatggaaggcacgtcctttggctttgggcaa
ctgatctataaagatgcggatgaatgtgtaatgtttggttccgaaatctgtaaaaacggt
ctctgtgcaaatatcgagcctggctactcctgttactgccgagtgggatactattatgat
accatccgcctggaatgtgttgatcacaacgagtgtcaggaggaggatacctgtgtggat
ggagagtgtgtgaacacgcccgggtcctttaattgtttctgcagccctccacttgtcctg
gatgtaacacgcagacgctgcatcaacgcaaacttcacatcagacgatctggatagtgag
gaagacatccacttggatatctgctgggaggaggtgtctagcgagtacatgtgctcgaga
ccccttacaagcagacggaccacctacacagagtgctgctgtctctatggtgtagcctgg
agcaatgactgtgccttttgcccaatgaggagctcagcggattatgcagcgctgtgtaac
cttccaaggacagatggcctgggggcagatggtctcagagacagaccaggctacgaatat
ggaccagatggacctttatatgggccaggctatttggatcttggaaatagcccttattac
aacaacccgggaccagagtatggaccccaggaccctgtccctttgaccccttttaggaac
cccagcaatgaatatgagttcagagggtccccgcctcttcgaacaaatcaaccgcaagat
ttccagcctcagtttgtaaacccttatgctgacaggttcgatgggtttgaaggattgcag
gctgaggaatgtgggattttgaatggctgtgagaatggccgctgtgtgagagtgcgggag
ggttacacctgcgactgctttgatggctttgagcttgatttaaacaaaatgctctgcatt
gatataaatgaatgtaaagacattagcgaacaaaactccctgtgcaaaaatggcaggtgc
gtgaacacggagggatcgtataaatgtgtgtgcttgccaggattcctggcatcgccgcag
ccggatcactgcattcccgaagagcctaaagcccacagcatggaggcggagcagtga
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integrated database retrieval system
