Polyodon spathula (Mississippi paddlefish): 121323982
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Entry
121323982 CDS
T07273
Symbol
lrfn5a
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121323982 (lrfn5a)
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121323982 (lrfn5a)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
LRR_14
fn3
Ig_DSCAM-DSCAML_C
Sp38
C2-set_3
Motif
Other DBs
NCBI-GeneID:
121323982
NCBI-ProteinID:
XP_041121275
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Position
12:8282919..8305538
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AA seq
776 aa
AA seq
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MEKLLFYLLVIGMAVKAQICPKRCVCQNLSPNLATLCAKKGLLFVPPNIDRRTVELRLAD
NFVSSIKRKDFANMTGLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKISNDIFS
GLSNLHHLIVNNNQLTHIFSEAFNDVLALEELDISYNNLETIPWEAIERMVSLHTLSLDH
NMIDYIPEGTFSHLHKLTRLDVTSNKLQKLPPDPLFQRAQALATSDITTSSSFALSFGGN
PLHCNCELLWLRRLTREDDLETCATPYHLTGRYFWSIPEEEFLCEPPLITRHTHEMRVLE
GQRATLRCKARGDPEPAIHWISPDGKLISNSSRALVYDNGTLDILITTVKDTGSFTCISS
NPAGEATQVVDLNIIKLPHLINSTNNIQEPDPGSSDISTSTKSGSNTSNNTGDTKINQDK
RVVIAEATSSTALIKFNFQRNIPGIRMFQIQYNGTYDDSLVYRMIPPTSKNFLINNLAAG
TTYDLCVLAIYDDGITSLTATRVVGCIQFTTEQDYVRCHFMQSQFLGGTMIIIIGGIIVA
SVLVFIIILMIRYKVCNSGDPNKATKVSNMHSQTNGAQGQGCGGSLPPSNSKLALGEEES
AQCHKAFYRDTVTQSSETCSIPDCSTTTSLVAQNWTSSTSGSPKPKRKPGPKSSAEPKID
TLPNAETQNTNRNNSTALQQPSRSPPIQPKQNPSFRRAQSKPNKYLTLPTENLRAKRRHS
LNEDFSKCNYYINSQKLGSLWSKRSLSMNGMLLQLEGSDSGKATFSSSEWILESTV
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactgcttttctatctgctggtcattggcatggcagttaaggcccagatctgt
ccaaagcgctgtgtctgtcaaaatttgtcccccaaccttgcaacactctgtgccaaaaaa
gggcttctatttgtgccaccgaacatcgaccggcgtaccgtggagttgcgtctggccgat
aactttgtttcaagcatcaaacggaaagactttgccaacatgaccggcctggtggacctt
accctgtctaggaatacaattagcttcatcactcctcatgcttttgctgacctccgcaac
ttgcgggccttacatctaaacagcaatcgactaactaagatttccaatgatatatttagc
ggtctctccaaccttcatcacttaattgtaaacaacaatcagctcactcacatcttctca
gaggcttttaatgatgttttggcattggaagagttggatatatcctataacaacctggaa
accatcccttgggaagccattgagagaatggttagcttgcacacactcagcctggatcac
aacatgattgactacatccctgagggaactttctcccacctccacaagctaacacgctta
gatgttacctccaacaaactgcagaaactcccaccagatccactcttccagcgtgctcag
gctctggctacgtcagatatcacgacttcttcatcttttgctctaagctttggggggaac
ccattgcactgcaattgcgaactgctttggctgaggcggctcacacgggaggatgattta
gagacttgtgccacaccataccatttaacgggacgatacttttggtctatcccagaagag
gagttcttgtgcgagcctccactcatcactcgccatacacacgagatgagggttttggaa
ggccagcgggctacactgagatgcaaagccagaggggacccagaaccagctattcactgg
atttcgcctgacggcaagctcatctccaactcttccagggcacttgtttacgataacggg
acgcttgacatcctcatcaccactgtgaaggacacaggctctttcacatgcatctcttcc
aatccagctggggaagccactcaagtagtggacctgaacataatcaagctcccccacttg
attaacagcacaaacaacattcaggagcctgaccctggctcctcagatatatccacttcc
actaaatctggttccaacacaagcaacaacacaggggacacaaagataaaccaggacaaa
agggtggtgattgcagaggcaacctcatcaacggcccttattaaatttaattttcagagg
aacatcccgggtatccgcatgttccaaatccaatacaatggcacctacgatgactccctt
gtttacagaatgatccctcccacaagcaaaaacttccttattaataacttggctgcggga
actacttatgacctgtgtgtcctggctatctatgatgatggcatcacctcactcactgca
accagggttgtgggttgcatccaattcacaacggagcaggattatgtccgctgtcacttt
atgcaatcccagtttctcggtggtacaatgattattattattggtgggatcatcgtggca
tctgtacttgtcttcatcatcatcctgatgatccggtataaagtgtgcaacagtggggac
ccaaacaaggccacaaaggtcagcaacatgcactcccaaaccaatggggctcaaggccag
ggctgcgggggatcactacccccctcaaactcaaagctggccttgggggaggaggaaagt
gcccagtgtcacaaggctttctacagagacactgtgacacagtcatcagaaacctgctcc
atccccgattgctccaccactacctctctggtagcccagaactggacctccagcacgtct
ggctctccaaagccaaaacgtaagcctgggccgaagtcatcggctgagcccaagattgat
actctgcccaacgccgagactcagaacacaaaccgtaataactccacagcgctgcagcag
cccagccgttctccacctatccagcctaagcagaacccatcttttagaagagcacaatcc
aagcccaataaataccttaccctaccaacagagaacttgagagcaaaacgcaggcattct
ctcaatgaagacttttctaagtgcaactactacatcaattctcaaaagctgggaagcttg
tggtctaaacggagcctatcaatgaacggcatgttgttgcagttggaaggctcagatagt
gggaaagctaccttctcaagttcggagtggatactggaaagcactgtgtga
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