Polyodon spathula (Mississippi paddlefish): 121323995
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Entry
121323995 CDS
T07273
Name
(RefSeq) vesicular integral-membrane protein VIP36-like isoform X1
KO
K10082
lectin, mannose-binding 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121323995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121323995
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pspa04091
]
121323995
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
121323995
Lectins [BR:
pspa04091
]
L-type lectins
121323995
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Lectin_L-type_dom
UL42
Motif
Other DBs
NCBI-GeneID:
121323995
NCBI-ProteinID:
XP_041121293
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Position
12:complement(37057464..37065580)
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AA seq
378 aa
AA seq
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MPCVFLTFTGVTPGSRKTSPYQGKMAFEKSQTAAMSGLRVVLSWKTGTLCLYLLLGWLPH
SPVQADITDGNSEHLKREHSLIKPYQGVGTSSTPLWDFGGSTLLTSQYVRLTPDERSKQG
SIWNRVPCFLKDWELHVQFKIHGSGRKNLHGDGIGIWYTKEKLQPGSVFGSQDHFVGLGI
FVDTFRNDLQGMDRSFPYISAMVNNGSLVYDHGKDGRPTELGGCSAEVRNQDHDTYLAVR
YSKGRLTVMIDVEGLNEWKECFDVSGVRLPTGYLFGSSAATGDLADNHDILSMKVYQLMV
EHTPEEESIDWTKIEPSVSLLKSPKDNIDDPTGNFRSSPLTGWKVFLLLLCALLGIIVCA
VVGAVVFQKRQERNKRFY
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgccgtgtgtgtttctaaccttcactggtgtaacaccaggaagcaggaagacgagtcca
taccagggaaagatggcgtttgaaaagagccagactgcagctatgtcggggctccgagtt
gtcctgtcttggaagactgggacattatgcctgtacctgcttttggggtggctgccacac
tctccggtccaggccgatataacagacggcaactccgaacacttaaagcgggagcactcg
ctcatcaaaccataccagggtgtggggacaagttcaactcctctctgggatttcggtggc
agcacactgttgaccagccagtatgtccgactgacccctgatgagagaagcaaacagggg
tccatttggaacagagtgccttgtttcctgaaggactgggagttacacgtccagttcaaa
atccatgggtcaggaaggaagaatctgcatggagatggtattggcatctggtacacaaaa
gagaagctgcaacctgggtctgtctttggaagccaggatcatttcgttggactgggcatt
tttgtggatactttccgcaatgatctccaaggaatggatcgttcattcccttatatatct
gccatggtaaataatggatccctggtttatgaccacggaaaggacggacgcccgactgaa
ctgggggggtgttcggcagaggtccgtaaccaggaccacgatacctacctggctgttcgc
tactccaagggccggctgacggttatgatagatgttgaaggcctcaatgaatggaaggaa
tgcttcgatgtctcaggagttcgactccctactggatacttatttgggtcctctgcagct
acaggtgaccttgcagataaccatgacatcctctcgatgaaggtgtaccagctgatggtg
gagcacactccagaggaggaaagcatagactggaccaaaatagagcccagtgtcagcctg
ctcaaatcacccaaagacaacatcgacgacccgactggaaatttccgaagctctcctctg
actggatggaaggtgttcctgctgctgctctgcgctttgcttggcatcatcgtgtgcgcg
gtcgtgggtgctgtcgtcttccagaaacgccaggagagaaacaagcgtttttattga
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