KEGG   Polyodon spathula (Mississippi paddlefish): 121324001
Entry
121324001         CDS       T07273                                 
Name
(RefSeq) protein bicaudal C homolog 1-A-like isoform X1
  KO
K18756  protein bicaudal C
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pspa03019]
    121324001
Messenger RNA biogenesis [BR:pspa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     121324001
SSDB
Motif
Pfam: KH_BICC1 KH_BICC1_1st KH_1 SAM_1 SAM_2 KH_Vigilin KH_GLD-3_1st KH-I_KHDC4-BBP KH_Mug60-KHD4
Other DBs
NCBI-GeneID: 121324001
NCBI-ProteinID: XP_041121300
LinkDB
Position
12:complement(28660338..28681338)
AA seq 874 aa
MATVKENLELQTASAQTSPPGDPNSCSSKEDWGESCPEPSEETLGDAGETAPTDPEWVEQ
RFRIDRKKLETMLHTPGDENHLTGEKFFQRVMNETNTQIKWPSKLKIGAKSKKDPHVKVE
GKKAGVLEAKKMILDVLETKVNKVTLKMDVAHTEHSHVIGKGGGNIKKVMEETGCHIHFP
DSNRNNVHLEKSNQVSIAGSLSGVESARRRIRDLQPLVLSFDLPMRMVSQTVPDVNSHVI
NHISQAFNISVSFRQQPKLYSTTCLVRGLQGNCVSIQKATAVLMELLLGADSSVRVSTQI
DLTSQQHVFLMGQNGANFINIMHMTQTQIVFPDLNCPQNRATLLIQGTADTVCLAKQQLQ
DCLPLCLMFDLKEDAEVEPHKLSQMMQNLGVFISIKPKVKQAAKSVVVKSLERNTVNLYE
ARRLLLGLETSEVAMAIKPACDIPLTNGLTNYWLNLITQQLNLTDSGPVPSFGAVVNAVL
QAKTKPTPPPGLTLQHQADRKAQKSDGKKPTEMNKNMLSEAEDLQSTPTADRQSADTVPE
SEEIQGTRAGTSRSSSQSDCSKEPWQEGSTAASRQNNALQNLKELLLKCDLRSDYSEKSS
SLRKDIIELQVTGLDAIKNEDYDYEKKKLLATRAMLKKPVETEVRTPTDTWSGLGFSKSM
PAEAVKELRCVNRRSYKSYLGNNLQEWSLQESLSKESLTSGSDSENWRERKDSASSSPPL
SSSSASSFPVFASSSLRSRGDKSSESFLSSSNYFDSISSLTCSSNCCSSPTHKQTADLPE
LFSQLGLCKYIDIFQQQEIDFQTFLTLTDEDLKEVGISTFGARRKMLLAISDFSKSKKKL
LDPPTVRPGYLEGGASGRLPRIVDMDIAAQSNRW
NT seq 2625 nt   +upstreamnt  +downstreamnt
atggcgactgtaaaggagaaccttgagctccagactgcctctgcccagacatcccctcca
ggggaccctaattcatgctctagcaaagaagactggggagaaagctgcccggaacccagt
gaggaaactttgggtgatgccggggagacagcccccacagacccagaatgggttgagcag
agattcaggatcgacaggaagaaactggaaactatgttacacacccctggagatgaaaat
cacttgactggtgaaaaattctttcaaagggtgatgaatgaaaccaacacacagatcaaa
tggccttccaagctgaagataggtgctaaatcgaagaaggatccacatgttaaggtggaa
gggaagaaagctggcgtcctggaagccaagaagatgatattagatgtattggaaacaaag
gttaacaaggtgaccctgaagatggatgtggcccacactgagcactcccatgtgattggg
aaagggggcggcaacattaagaaggtcatggaggaaacaggctgccatatccacttccct
gactctaaccgaaacaatgtccatctggagaagagcaatcaggtttctatagccggatca
ctttctggtgtggaatctgccaggagaagaataagggatctgcagcctttggttctaagc
tttgacctgccgatgagaatggtctctcagacagtaccggatgtgaactctcatgtgatc
aaccacatcagccaggcctttaatatcagcgtgagcttcagacagcagccaaaactctac
agcaccacctgtctagtgagaggactgcaggggaactgtgtctctatccagaaagccact
gcagtactgatggagctgctgctaggtgcagattccagtgtcagggtcagcacccagatc
gacctcacctcccagcagcatgtcttccttatgggacagaatggagccaacttcatcaac
atcatgcacatgacccagacgcagattgtgtttccagacctgaactgcccacagaacaga
gccacgctgctcattcaaggcactgcagatactgtctgcctggccaaacagcagctgcag
gactgcctcccactctgcttgatgtttgatctgaaggaggatgctgaagtggagccccac
aaactcagccagatgatgcagaaccttggagttttcatcagcatcaaacccaaagtgaag
caggcagccaagtctgttgtagtgaagagtttggaacgaaacactgtcaacttgtatgaa
gccagaagattgctgttgggcctagaaaccagtgaagttgccatggcaataaagcctgcc
tgcgacattcccttaacaaatggcctaactaattattggctgaatttgataacacaacaa
ctgaacctcactgattcaggacctgtcccctcgtttggagctgtggtaaatgctgtactg
caggctaaaaccaaaccaacaccccctcctggtctcaccctgcaacatcaagcagacaga
aaagcacaaaagagtgatggaaagaaacccactgaaatgaacaagaatatgctttcagag
gctgaggatttgcagagcacccccacagcagacagacagtctgcagacacggtgccagag
tccgaagaaatacagggcacaagggcaggcacaagcagaagcagcagccaatcagattgt
agcaaagagccctggcaggaaggaagtacagcagcctcacgtcaaaacaatgcacttcag
aacttgaaagaactattgttaaaatgtgatttgagaagtgactactcagagaaatcaagc
agtttaaggaaagacataattgaactacaggtgacgggcctagatgctatcaaaaatgag
gattatgattatgaaaaaaagaaacttttagcaacacgagcgatgctgaagaaaccagtg
gagactgaggtgcggacacccacagacacctggagtgggctgggcttctccaagtcaatg
ccagcagaggccgtgaaggagctgcgatgtgtgaaccgccgaagctacaagtcttacctg
gggaacaacttacaggaatggagtttgcaggaatccctcagtaaagagagtctgaccagc
ggcagtgactctgaaaactggagggagcggaaggactctgcatcttcctcaccccctctc
tcatcttcctcagcctcctccttccctgtctttgcttcctcatccttgagaagcagaggt
gacaaatcctccgagtcgttccttagcagcagtaattactttgacagcatctcatctctg
acctgctccagcaactgctgctccagtcccacccacaaacagacagcagacctgccagag
ctctttagccaactggggctatgcaaatacattgatatcttccaacagcaggagattgac
ttccagacattcttaacgctcactgatgaggatctgaaagaagtgggaatttcaactttt
ggtgcaaggagaaaaatgctgcttgcaatttcagatttcagtaaaagtaagaagaagctt
ctggatccccctacagtccggccaggctacctggaaggcggagccagtgggaggctgcct
cggatagtggacatggacatcgctgctcagagcaaccgttggtaa

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