Polyodon spathula (Mississippi paddlefish): 121324053
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Entry
121324053 CDS
T07273
Symbol
hoxb13a
Name
(RefSeq) homeobox protein Hox-B13a
KO
K09298
homeobox protein HoxA/B/C/D13
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121324053 (hoxb13a)
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
121324053 (hoxb13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HoxA13_N
Homeodomain
Homeobox_KN
DUF1510
CI-B14_5a
Homez
ACDH_C
Motif
Other DBs
NCBI-GeneID:
121324053
NCBI-ProteinID:
XP_041121401
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All DBs
Position
12:43622816..43624941
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AA seq
306 aa
AA seq
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MTTALVLNPRWVDTVMFVYENNLDEINKSMEGLVGAGNFSANQCRNLMAHSALGGHPSSL
VHGSSYPAVDVSGSGSGDVGKQCAPCSAVPQGSSTAPLPYGYFGGGYYSCRMGRGSLKSC
TQPTALSSYSSEKYMDTPVPSEEYPSRAKEFAFYHGYPSPYQPMASYLDVSVVQTISGAG
EPRHETLLPMDSYQPWALTNGWNSQMYCSKDQGQTGHIWKSALADAVAHQQDGSSFRRGR
KKRIPYTKVQLKELEKEYAANKFITKDKRRKISAATNLSERQITIWFQNRRVKEKKFVAK
VKTNTP
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaccactgccctggtccttaatcctcgctgggtggacactgtcatgtttgtatacgaa
aacaacttggatgagataaacaagagcatggaaggactggtgggtgcaggcaacttctca
gccaaccaatgcaggaatctaatggcccattctgccttgggaggccacccttcctcgctg
gtgcatggctcaagctatcccgcagtagatgtgtccgggtcgggatcaggggatgtcggc
aaacaatgcgccccttgctcggcagttccgcaaggttcctccacggcacctctaccttat
ggatatttcggcggtggttattattcgtgccgaatggggagagggtctctcaagtcttgt
acccaacccactgccttgtctagctattcttcagaaaagtatatggacaccccggttccg
tctgaagaatacccgagtagagccaaggaatttgccttttatcatggctatcccagcccc
tatcaacctatggcgagttatctagacgtttctgtagtgcagacaatcagtggtgcaggg
gagccgaggcacgagactctactgccaatggacagctatcaaccatgggcactgaccaat
ggatggaacagccagatgtactgctcaaaggatcaggggcagactggccacatctggaaa
tctgcactagcagacgccgtcgcgcatcagcaggacgggagctcgtttcgccgtggccgg
aagaagaggattccttacaccaaagtccagctcaaggaactggaaaaagaatacgcggcc
aacaaattcatcactaaagacaagaggcgaaagatttccgcagccaccaacctgtccgaa
agacaaataaccatctggtttcaaaatagaagagttaaagaaaagaaattcgtggccaaa
gtcaaaaccaacactccctaa
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