Polyodon spathula (Mississippi paddlefish): 121324059
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Entry
121324059 CDS
T07273
Name
(RefSeq) signal transducer and activator of transcription 5B-like isoform X1
KO
K11224
signal transducer and activator of transcription 5B
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04012
ErbB signaling pathway
pspa04081
Hormone signaling
pspa04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04012 ErbB signaling pathway
121324059
09133 Signaling molecules and interaction
04081 Hormone signaling
121324059
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
121324059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121324059
Transcription factors [BR:
pspa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
STAT
121324059
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GFIT
Motif
Pfam:
STAT_bind
STAT_alpha
STAT_int
STAT_linker
SH2
TetR_C_12
Motif
Other DBs
NCBI-GeneID:
121324059
NCBI-ProteinID:
XP_041121412
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Position
12:complement(45353408..45390307)
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AA seq
841 aa
AA seq
DB search
MSAAVKEGRMRSAFWRGKKAAIRDCCTSGTRQVCRVNLQKNLLHLHGNRDFRSEKMAVWI
QAQQLQGEALHQMQSLYGQHFPIEVRHYLSQWIEGQTWDSIDLENPQEEFRAKRLLESLV
QELQNKAEHQVGEDGFLLKIKLGHYASQLKSTYDRCPLELVRCIKHILYTEQRLVREATD
SSSPGGGLLDSMSQKHLQINQSFEELRMMTQDTENDLRKLQHNQEYFIIQYQESLRIQAQ
LSSLTNLPPADRLLREPALQTKRATVEAWLTREANTLQKYRLDLAEKHQKTLQLLHKQQT
IILDDELIQWKRRQQLSGNGGPPEGGLDVVQSWCEKLAEINWQNRQQIRRAEHLRQQLPI
PGPIEELLTDLNKHITDIISALVTSTFIIEKQPPQVLKTQTKFAATVRLLVGGKLNVHMN
PPQVKATIISEQQAKTLLKKENTRNDSSGEILNNNCVMEYHQATGTLSAHFRNMSLKRIK
RSDRRGAESVTEEKFTILFESQFSVGGNELMFQVKTLSLPVVVIVHGSQDNNATATVLWD
NAFAEPGRVPFSVPDKVLWPQLCEALNMKLKAEMQSSRGLSEENLVFLAQKAFSSSSINP
EEYRSLTMTWSQFNRESLPGRNFTFWQWFDGVMELTKKHLKPHWNDGAILGFVNKQQAQD
MLMSKPNGTFLLRFSDSEIGGITIAWVADNPNKAGERMVWNLMPYTTKDFSIRSLADRIS
DLNHLLFLYPDRPKDEVFSKYYTPPLSKAVDGYVKPQIKQVVPEFATASSDSTGGNQAFM
DHASSPAVSHSHAYGMYPPSADSMLDGDGDFDLDDTMDVARHVEELLRRPMESQWIGNNQ
S
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagctgtcaaagaaggcagaatgcggagtgcattttggaggggaaaaaaagca
gcaatcagggactgctgcacaagtggaacacggcaggtttgtcgtgttaatctccaaaag
aacctcctgcatttacatggtaacagagacttcagatcagagaagatggcagtgtggatc
caagcccagcagctgcagggggaggccttgcaccagatgcagtctctgtatggccagcac
tttcccatagaagttcgtcattacctctcgcagtggattgagggtcagacatgggactcg
atcgatctggaaaacccccaggaagaatttcgagcaaaacgtctgctggagagtttggtg
caggagctgcaaaacaaagccgaacatcaagttggggaggatggttttctactgaaaatc
aaactagggcactacgccagtcaactgaagagcacctatgaccgatgtccattggagctg
gttagatgtataaaacacattctgtacaccgagcagagacttgtgcgggaagcaactgat
tctagctcccctggtggaggcttgctagacagcatgtctcagaagcacctccagatcaac
cagtccttcgaggagctgcgtatgatgacccaggacactgagaatgacctgcgcaagctg
cagcacaaccaggagtacttcatcatccagtaccaggagagcttgcgcatacaggctcag
ctgtccagcctgactaatctcccacccgctgaccgtctcttgagagaacccgctctgcag
accaaaagagccactgtggaggcctggttaacgagggaagctaatacactacagaaatac
agactggatctagctgagaagcaccagaagacactgcagttgctccacaagcagcagacc
atcatcctggacgacgagctcatccagtggaagcggcggcagcagctgtcaggcaacggg
ggacctcctgagggaggcctggatgtggtgcagtcctggtgtgagaaactggcagagata
aactggcagaaccgacagcagatcaggagagcagaacatctccgacagcagctgcccatt
ccaggcccaatagaagagttactcaccgatctcaacaagcatatcacagacattatatcc
gcgctcgtgacaagcacctttattattgagaagcagcccccccaggtgttgaaaacgcag
acgaagtttgccgctacagtgcgcttgctggttggggggaagttgaatgtccacatgaac
ccgcctcaggtgaaagccacgataatcagcgagcagcaagccaagaccctcttgaaaaaa
gagaacaccaggaatgacagtagtggagagatcctaaacaataactgtgtaatggaatat
caccaagccacaggaaccctgagtgcccactttagaaacatgtccttaaaaaggatcaag
cgctcagatcggcgaggggcagagtcggtaacagaagagaagttcacaatcctgttcgag
tcacagtttagcgtcggtggaaatgaactaatgtttcaagtaaagacgttatcactccct
gtagtagtgatagttcatggaagccaagacaacaatgccactgccacggttctctgggat
aatgcatttgctgagccaggaagggtgccgttctcagttcctgacaaagtgctttggccg
cagctctgtgaggctctcaacatgaagctcaaggcagaaatgcagagtagcaggggcctg
tcggaggagaatctggtgttcctggcacagaaagctttcagcagctccagcatcaacccg
gaggagtaccgcagcttgaccatgacctggtcacagttcaatagggaaagtttacctggc
cggaacttcacattttggcagtggtttgatggtgttatggagctcacaaaaaagcacctg
aagcctcattggaacgatggggctatcctggggtttgtgaacaagcagcaggcgcaggac
atgctcatgtcgaagccgaacggcacgtttctgctgcgcttcagcgactcagagattgga
ggcataacgattgcctgggtggcggacaatcccaataaagccggggagaggatggtctgg
aatttaatgccgtacacaaccaaagatttctctatccgatctttagctgaccgcattagt
gatctgaaccacctgctgtttctgtatcccgacagaccgaaagatgaagttttctcaaaa
tactacacccctcctctgtctaaagcagtggatggatacgtaaagccacagatcaaacaa
gtagtaccagagtttgccacagcctcttcagattctacaggtggaaatcaagcattcatg
gatcacgcttcgtcacctgctgtaagccattcacacgcatatggaatgtatccgccaagc
gctgattcaatgctggatggagatggggattttgacctggatgacacaatggatgtagcg
agacatgtggaagagctgctgcgtagaccaatggaaagtcagtggatcggaaacaaccag
tcgtga
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