Polyodon spathula (Mississippi paddlefish): 121324073
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Entry
121324073 CDS
T07273
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04137
Mitophagy - animal
pspa04144
Endocytosis
pspa04145
Phagosome
pspa04148
Efferocytosis
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121324073
04145 Phagosome
121324073
04137 Mitophagy - animal
121324073
04148 Efferocytosis
121324073
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121324073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121324073
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121324073
04031 GTP-binding proteins [BR:
pspa04031
]
121324073
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
121324073
Endosome - Lysosome transport
121324073
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121324073
Exosomal proteins of other body fluids (saliva and urine)
121324073
Exosomal proteins of colorectal cancer cells
121324073
Exosomal proteins of bladder cancer cells
121324073
GTP-binding proteins [BR:
pspa04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
121324073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MCR_beta
AAA_16
Motif
Other DBs
NCBI-GeneID:
121324073
NCBI-ProteinID:
XP_041121459
LinkDB
All DBs
Position
12:complement(45232946..45251592)
Genome browser
AA seq
216 aa
AA seq
DB search
MAGRGGVARSNGLAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKSDLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQSATGTASRSRGVDLEENSPQSRSQCCSP
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcggggaggcgtggcgcgatcaaacgggctggctgctggaaacaaaatctgc
caattcaaactggtgctcctcggggagtccgctgtaggcaaatccagtctggtgctgcgc
ttcgtaaagggacagttccacgagtaccaagaaagcacaatcggggctgccttcctcaca
cagacagtctgcttggacgacacaacggtcaaatttgagatctgggacacggccgggcag
gagcgatatcacagcctggcaccgatgtattacagaggggctcaggccgccatcgttgtt
tatgacatcactaatacagatacatttacacgtgctaagaactgggtaaaggagcttcag
agacaagccagtcctaacatagtgattgctttggcaggcaacaagtctgaccttgcaaac
aagagagccgtggatttccaggaagcacaagcgtatgctgatgacaacagtttgctgttt
atggagacttctgcgaagaccgcgatgaatgttaatgaaatatttatggctatagccaag
aaactcccgaagaacgagccccagagtgccactggcacggcaagccggtctcgaggagtg
gacctagaagagaacagcccacagagccggagccagtgctgcagcccctaa
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integrated database retrieval system
