Polyodon spathula (Mississippi paddlefish): 121324093
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Entry
121324093 CDS
T07273
Name
(RefSeq) RING finger protein 145-like
KO
K23789
E3 ubiquitin-protein ligase RNF145 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121324093
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121324093
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121324093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRC8_N
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-RING_11
zf-ANAPC11
Prok-RING_4
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
121324093
NCBI-ProteinID:
XP_041121489
LinkDB
All DBs
Position
12:complement(31777353..31791601)
Genome browser
AA seq
748 aa
AA seq
DB search
MAMKDNLKAVLNVGLRVPSIMLLDVLYRWDVSSFFQQIQKSTLSNNPLFQYKYLALNMHY
VGYILSIVLLTLPRQQLVQLYLYVLTALLLFAGHQISRDYVRNELESEYDGPIYLEPLTM
NRFTTALIGQLVVCTLCSCVMRTKQIWLFSAHLLPLVARLCLVPLETIVFINRFAMIFTG
LEVLYFLASNLLVPFNLAKTAYRELAQVVEVYGLLALGMSLWNQLVVPVLFMVFWLVLFA
LQIYSYFSIRDHPTSRERLLFFFLTSIAECCSTPYSLLGLVFTVSFVALGVLTLCKFYLQ
GYRAFMNDNTMNRGMTEGITLLILAVQTGLIELQVIHRAFLLSIILFIVVASILQSMLEI
ADPIVLALGASRDKSLWKHFRAVSLCLFLLVFPTYMAYMICQFFHMDFWLLIIISSSILT
SLQVLGTLLIYVLFMVEEFRKEPVENMDDVIYYVNGTYRLLEFLVALCVVVYGVSETIFG
EWTVMGSTIIFIHSYYNVWLRAHLGWQNFLLRRDAVNKIKCLPMATEEQLEKHNDICAIC
YQDMKLAVITPCSHFFHAGCLKKWLYVQETCPLCHSQLKSQSQQATAAAPPQGAVQPPAQ
EAPQNQERDVQENPPPEEQGSQGTPLHEGSGSSSRVSPGEGQSGTSSSTVLQSPDAQGQP
KLECQGNSLEGLTANQASRQEAYSSSSPHCSAGSNDSESMNTHSSVGVLKEHQGDSEVPS
HHIAGCLQDSPEIPEEEVERLAESTQKL
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggccatgaaggataacctcaaagctgtcttgaacgtgggtctgcgggtgcccagcatc
atgctcttggatgttctctaccgatgggacgtgagctccttcttccaacagatccagaaa
agcaccctcagcaacaaccccctcttccaatacaaatacctggcactcaacatgcactat
gtgggttatatattaagcatagttctcctgacgttgcctcggcaacagctggtccagctc
tacctgtatgttctcactgcattgctcctgtttgccggccatcagatatctagagattat
gtgcggaacgaactggaatctgaatacgatggtccaatatacctagagcctcttacaatg
aatcgcttcacaactgcacttattggtcagctggtggtgtgcactctctgctcttgcgtc
atgcgcaccaaacagatctggctcttttccgcccatctgctgcccctggtggcgcgcctc
tgtctggtgcccctggaaaccattgtcttcatcaaccgctttgccatgatcttcactggc
cttgaggtgctctacttcctggcctccaacctgttggtccctttcaacctggctaagact
gcatacagagagctggcgcaagtggtggaggtgtacggtctcctggctctgggcatgtcc
ctgtggaatcagctggtggtgccggtcctgttcatggtcttctggctggttctgttcgct
ctgcagatctactcctacttcagcatcagggaccaccccacctccagagagaggctactc
ttcttttttctcacaagcattgcagagtgctgcagcaccccctactctctgctgggtttg
gttttcactgtctccttcgtggctctgggcgtcctcaccctctgcaagttttatctgcag
ggataccgtgccttcatgaacgacaacacaatgaacagggggatgacggaggggatcaca
ttgctgatcctggctgttcagacagggctgattgagctgcaggtgattcaccgagcattc
ctgctcagcatcattctcttcatcgtagtggcctccatcctgcagtccatgctggagatt
gctgaccccatcgttctcgcactcggagcctctcgagacaagagcctgtggaagcacttc
cgtgcagtgagcctctgtctcttcctcctggtgttcccaacctacatggcctacatgatc
tgccagttcttccacatggacttttggcttctcatcatcatctcaagcagtattctcacc
tccctgcaggtgctgggcacgctcttaatctacgtgctgttcatggtggaggagttccgc
aaagagccagtggagaacatggacgatgtcatctactacgtcaacggcacctaccggctg
ctggagttcctggtggccctttgcgtggtggtctacggtgtctcagagaccatctttggg
gagtggactgtcatggggtccaccatcatcttcatccactcctactacaatgtgtggttg
cgagctcacctgggctggcagaacttcctgctgcgccgcgacgccgtcaacaagatcaaa
tgtctgccgatggccaccgaagagcagctcgagaaacacaacgatatctgtgccatctgt
taccaggatatgaagttggcggtaatcaccccttgcagtcatttcttccacgctggctgc
ctcaagaaatggctgtatgtccaagagacctgccccctttgtcacagccaactaaaaagc
caatcgcagcaagccacggcagctgcacctcctcagggggcggtgcaacccccagcacag
gaagccccccagaaccaggagagggatgtgcaggagaaccctccaccggaagagcaggga
agccaggggacacccctacacgaggggtctggctccagcagcagagtctcaccaggggag
gggcaatctgggacttcaagcagcactgtgctgcaatctccagatgcccagggccagccc
aaactggaatgccaaggcaacagtctagagggactaacagccaaccaagccagtagacag
gaggcttacagttcttcatctccacactgctctgctgggtcgaatgattcagaaagcatg
aatacacattccagtgtaggggttttaaaggagcatcagggagactccgaggtacccagt
catcacattgctggatgtttacaggattctccagagataccggaagaggaggttgagagg
cttgcagaatctactcagaagttgtga
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integrated database retrieval system
