Polyodon spathula (Mississippi paddlefish): 121324138
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Entry
121324138 CDS
T07273
Name
(RefSeq) speckle-type POZ protein
KO
K10523
speckle-type POZ protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
121324138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121324138
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121324138
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BACK
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
121324138
NCBI-ProteinID:
XP_041121587
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Position
12:complement(39536376..39679909)
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AA seq
374 aa
AA seq
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MSRVSSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSG
ANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK
VPECRLADELGGLWENSRFTDCSLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR
VEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCNNLSVD
NAAEILILADLHSADQLKTQAVDFINYHAADVMETSGWKSMVVSHPHLVAEAYRSLASAQ
CPFLGPPRKRLKQS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagagtgtcgagtccccctcctcccgcggaaatgtcaagcgggcctgtggcagag
agctggtgttacacgcagattaaagtggtaaagttttcctacatgtggaccatcaacaac
ttcagcttctgcagggaggagatgggggaggtcatcaagagttcaacgttctcgtctgga
gccaacgataagttgaaatggtgtctgcgagtgaaccccaaggggctggatgaggagagt
aaagactacctgtctctctacctgctgctcgtcagctgtcccaagagcgaagtgcgagcc
aagttcaagttctctattctcaacgccaaaggggaggagaccaaagccatggagagccag
cgggcataccggtttgtgcaagggaaggactggggcttcaagaagttcattcgaagggat
ttccttttggatgaggccaatggactcctgccagacgataagctcaccctattctgtgag
gtgagcgtggtgcaggactctgtcaacatctcgggacagaacaccatgaacatggtgaag
gtgccggagtgccggctggcggatgagctgggggggttgtgggagaactctcgcttcaca
gactgctccctgtgcgtggcaggacaggagttccaggcacacaaagcaatactcgcagct
cgttcaccagtcttcagtgcgatgtttgagcatgaaatggaggagagtaaaaagaaccgt
gttgaaataaacgatgtggagcccgaggtttttaaagagatgatgtgttttatctatacg
gggaaggcccccaatcttgacaagatggcagatgacctgctggctgctgcggacaagtat
gcactggagcgcttgaaagtgatgtgtgaggacgcactctgcaataacctgtcagtggat
aatgctgcagagattttaatcctggcggatcttcacagtgcagaccagctgaagacccaa
gcggtggacttcattaactaccatgcggcggacgtgatggagacatctggctggaagtcc
atggtggtgtctcaccctcacctggtggcagaggcttaccgctccttggcgtccgcacag
tgccccttccttggccctccccgcaagcgcctgaagcagtcctaa
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