Polyodon spathula (Mississippi paddlefish): 121324164
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Entry
121324164 CDS
T07273
Name
(RefSeq) PDZ and LIM domain protein 7-like
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121324164
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121324164
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121324164
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GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121324164
NCBI-ProteinID:
XP_041121638
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All DBs
Position
12:36024064..36062024
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AA seq
432 aa
AA seq
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MDVYSVTLEGPAPWGFRLQGGKDFSMPLTVSRLTPGGKAVQANIGVGDWVVSIDGTNTES
MTHVEAQNKIRACTGNLTLSLSRTVNTPGSNQKDSLAAASPQPKYSFAPSMSLNKMARPF
GAREGSGNSKSGPVTKPVSYVPAAAKLNHSSQGPVSVLQQHNGHEVNQPAAKTASTVAAV
EKPHSGLAKAPAPSSTPSYRPPWITDPGFADRYRPDKTSTVLTQHSQPAQPTPVQNRSSI
MQAAQQAPEGSGRTPVCGQCNKIIRGRYLVALGRSWHPEEFTCCQCKVVLEEGGFFEERG
SIYCTKCYDSRYAPNCAKCKKTISGEIMHALKMTWHMQCFVCTACKAPIRNKAFYMEEGE
PYCEKDYDKMFGTKCSGCDFKIDAGDRFLEALGTSWHDTCFVCAICQINLEGKTFYSKKD
KPLCKTHAFSHV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctactcggtgactcttgagggaccggctccctggggattcagactgcaagga
gggaaggatttcagcatgccactcacagtctcgcggctgacccccggcgggaaggccgtg
caggctaacattggcgtgggagactgggtggtgtccatcgacggtaccaatacagagagc
atgacccatgtggaggcacagaacaagatccgagcatgcaccggcaacctgacactgtcc
ctaagcagaactgtcaatactcctgggtctaatcagaaggactcgcttgccgctgcctcg
cctcagcccaagtattcgtttgctcccagcatgtctcttaataagatggcccgtcccttt
ggtgccagggaaggctctggcaactcgaaatctgggccggtcaccaaaccagtgtcctat
gtccccgcggcggcgaaattgaaccacagctcccagggtcctgtcagtgtactgcagcaa
cacaatggccatgaagtgaatcagcctgctgccaagacggcatccactgtggcagctgtt
gagaaaccccatagcggtctggccaaggctcctgctccttcctcaaccccctcatatcgc
cctccttggataacggacccaggcttcgctgaccgataccgtcctgacaagaccagcaca
gtgctgacccagcacagccagcccgcccagcccacgccagtgcaaaaccgtagctccatc
atgcaggcagcgcagcaggctcccgagggcagtggaaggaccccggtgtgtgggcagtgc
aacaagatcatcagaggccgatacctggtggcactgggcagatcctggcaccctgaggag
ttcacgtgctgccagtgcaaggtggtgctggaggagggaggcttcttcgaggaaagaggc
tccatctactgcaccaagtgctacgacagccgctacgcacccaactgtgccaagtgcaag
aagacaatttctggagagatcatgcatgccttgaagatgacctggcacatgcagtgcttt
gtatgcactgcctgcaaggccccgatcaggaacaaagccttctacatggaggagggggag
ccctactgtgagaaagactatgacaagatgtttggcactaaatgcagtggctgtgacttc
aagatcgatgctggagaccgcttcctggaggctctgggcactagctggcatgatacctgc
ttcgtctgcgctatctgccagattaacttggaagggaagaccttttattctaagaaggac
aagcccttgtgcaagacccatgcgttttcacatgtctga
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