Polyodon spathula (Mississippi paddlefish): 121324190
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Entry
121324190 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein transferase RMND5B-like
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121324190
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121324190
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
121324190
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
Rtf2
zf-RING_2
zf-Nse
Motif
Other DBs
NCBI-GeneID:
121324190
NCBI-ProteinID:
XP_041121688
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All DBs
Position
12:complement(36904626..36912492)
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AA seq
392 aa
AA seq
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MEQCACVERELEKVLHRFVMYGHLSEESLDELLRYVSELRGQLVNSGLKDSDLDGQFSQA
MGRCCKNIKDTVQRLASSHKDIHGSVSKVGKAIDRNFDAEVSAVVAENMWESRERQKCLS
ESIVEHLYRQGMLSVAEDLCQESGVVIDRSMKQPFLELNRILEALRMQDLRPALEWAIAN
RQRLLDLNSTLEFKLHRLYFISLLNGGIENQVEALRYARHFQPFAAHHQRDIQILMGSLV
YLRHGIENSPYHNLLETQQWTEICNIFTRDACALLGLSVESPLSVSFASGCMALPVLMNI
KQVIEQRQCTGVWTHKDELPIEVDLGKKCWYHSVFACPILRQQTSETNPPMKLLCGHVIS
RDALNKLMSAGKLKCPYCPMEQNPSDAKRIIF
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtgtgcctgtgtggagcgggagctggaaaaggtcctccacaggtttgtgatg
tacggacacctctcggaggaaagcctggacgagctgctccgatacgtgtccgagctccga
gggcagctggtcaactcaggtctgaaagattcggacttggacggtcagttctcccaggcg
atgggccgctgctgtaagaatattaaggatacagtgcagagattggcttccagccacaaa
gatatccatggcagcgtttctaaagtggggaaagccattgaccggaatttcgacgcagag
gtgagtgcggtggtggcagaaaacatgtgggagtcccgcgagaggcagaagtgcctaagt
gaatccatcgtggagcacttgtaccgacagggcatgctgagtgtggctgaggacctgtgc
caggagtctggggtagtcattgataggagtatgaagcagccctttctggaactgaaccga
attttagaggctttgagaatgcaggacctcagaccagccctagaatgggcgattgcaaac
aggcagcgtctcttggacctgaacagcaccctggagttcaagctgcaccggctctacttc
atcagcctgctgaacggggggatcgagaaccaggtggaggctctgcgatacgcacgccac
ttccagcccttcgctgcacaccaccagagagatatccagattctgatgggcagcctggtg
tacctgcgtcacggcattgagaactcgccctaccacaacctgctggagacccagcagtgg
acagagatctgcaacatcttcaccagagacgcctgtgcgcttctgggactatctgtagag
tcgcctcttagcgtcagttttgcttcaggttgcatggcgctgcctgtcctgatgaacatc
aagcaggtgattgagcagagacaatgcaccggagtctggacacacaaagatgagcttccg
atcgaggtcgaccttggtaagaagtgctggtatcactctgtgttcgcgtgccccattctc
cgccagcagacctccgagaccaacccccccatgaaactgctgtgcggacacgtcatctcc
cgcgatgccctcaacaaactcatgagcgccggaaagttgaaatgcccatactgcccaatg
gagcagaacccttcggacgctaagcgaatcatcttttga
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