Polyodon spathula (Mississippi paddlefish): 121324194
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Entry
121324194 CDS
T07273
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04082
Neuroactive ligand signaling
pspa04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121324194
04082 Neuroactive ligand signaling
121324194
04519 Cadherin signaling
121324194
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121324194
Ion channels [BR:
pspa04040
]
Ligand-gated channels
GABA-A
121324194
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
121324194
NCBI-ProteinID:
XP_041121717
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All DBs
Position
1:complement(91419781..91493218)
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AA seq
454 aa
AA seq
DB search
MKRKLYAFEYLCICLWLGIFWQARSAVANSQEEEAKNNITIFTRILDRLLDGYDNRLRPG
LGDRVTEVKTDIYVTSFGPVSDTDMEYTIDVFFRQSWKDERLKFKGPMNILRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHAC
PLKFGSYAYTTSEVTYIWTLNATESVVVAEDGSRLNQYDLLGQTVGQETIKSSTGEYTVM
TAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVNDKKKEKASI
IKKNNAYAVAVANYAPNITKDSVLPTISKSATADPNKAKPEAKPQEAKKTFNSVSKIDRM
SRILFPVLFGSFNLVYWATYLNREPAIKDLVPSK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaagctatacgcgtttgaatatctatgtatttgtctttggttggggatattt
tggcaagcaagatcagcagtggccaactcccaggaagaggaagccaaaaataacatcacc
atctttacaagaattcttgacaggcttctggacggctatgataatcgacttagacctgga
ttaggagacagagtaacagaagtgaagactgacatctatgttaccagttttggacctgtt
tctgatacagatatggaatacacaatagatgttttcttccgacaaagctggaaagacgag
agattaaaatttaaaggaccaatgaacatcctccggttaaacaacctgatggccagcaaa
atctggactcctgacacattctttcataatgggaagaaatctgtggcacacaacatgaca
atgccaaataaactgctaagaatccaagatgatggaacattgctgtatacgatgagactg
actgttcaggccgaatgcccaatgcatcttgaagattttccaatggatgcccatgcttgt
cctttgaagtttggaagctatgcctacactacatcagaagtcacatatatttggacactc
aatgccactgaatcagttgtggttgcagaagatggttccagattgaatcagtatgatttg
ctcgggcaaaccgttggacaagaaactattaaatccagcacaggtgaatatacagtcatg
acagcacattttcacttgaaaaggaagattggctactttgtgattcagacttatttgcca
tgtattatgacagtcattctgtcccaagtgtcgttttggctgaacagagaatctgtccct
gccaggactgtgtttggagtaacaactgtgctgacgatgacaactctgagtatcagcgct
cgcaattccctgcctaaagtggcttacgcaacagccatggactggttcatagctgtgtgt
tatgcctttgtcttctctgcgttgatagaatttgccacagtgaattactttacaaagcgt
ggatgggcctgggatggtaaaagtgtagtgaacgataagaaaaaagaaaaagcctccatc
attaagaaaaacaatgcatatgcagtagctgtcgctaactatgcaccaaatatcaccaag
gactctgtactgcccaccatttcaaaaagtgccacagcagatccgaacaaggcaaagcca
gaagcaaaaccacaggaagccaagaagacattcaacagtgtaagcaaaatcgatagaatg
tccagaatattattcccggttttatttggatcctttaacttggtatattgggccacatat
ttaaacagagaaccagccataaaagatcttgtaccgtcaaagtag
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