Polyodon spathula (Mississippi paddlefish): 121324195
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Entry
121324195 CDS
T07273
Name
(RefSeq) autophagy-related protein 2 homolog B-like isoform X1
KO
K17906
autophagy-related protein 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04136
Autophagy - other
pspa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121324195
04136 Autophagy - other
121324195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121324195
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121324195
Membrane trafficking [BR:
pspa04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
121324195
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121324195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
DUF7054
Motif
Other DBs
NCBI-GeneID:
121324195
NCBI-ProteinID:
XP_041121721
LinkDB
All DBs
Position
12:5014804..5033311
Genome browser
AA seq
2082 aa
AA seq
DB search
MPWPFSESIKKRACRYLLHRYLGNFLQEKLSLDQLSLDLYQGTGSLAQVPLDKWSLNEIL
ESVDAPFEVIEGFIQTISLSVPWASLLQENCALEVKGLEVVFRPRPRMASGSEPMYWSSF
MTSSMQLAKECLSQRLTDEQAEGFQPLEGLEKFAETIETVLRRVKVTFLDTVLRIEHVPE
NSKTGIALEMRISKIVYCDETGDECSGMNVHQPTMFAHKNLQLTGVSVFWDEFSEAARTC
PKSSTPQTETEPKLSPSWNPKIICEPHPQFTRTVSEVAPFKPVQIGCLNGRMELGLILKQ
NEALPGAKLDVDGQIDSINVLLSPRQVHLLLDMLGVFSGPESSERTSLSCKDRKSRPIQQ
EDEYRLHMELHRFLKKDPLGAGGLEEQGLFESETRTTSSREEDVFFSMAEMEMSHSLSSL
PPLGDPPTVDLELSLNSNYASSPGGSPLGNVTTVWDDYLDPPRHREKLAQDPPFLSRGMQ
PPQKLLRQTSHPSKPHSVDESRPEVVFRLALGSLSVSVLHIDPLPPPETALNLNPLTPMA
SDFFSRIEKISPAELCKGDFPHFHPIFDEACPYDHLRFMGTGIKVTYEQRQGSSLRSLST
DVSVGQIELLECLFPTDSRSSAPQYTELVTFDSDCLKESRPPACLHLLYKFSERRGPQGS
QVRLSSLPQKADFQIELGPVHSELDISIVDRLNSLLQPQKLVTTEMMASHMYTSYNKHVS
LHKAFTEVFLDDSRTPANCRMSVLVNVPVLNLAVRFPIPDLRSDQERGPWFKKSLQKEIL
HLEFKDVEFKTEFTGGSSPEQTKLELTFKELTGKFQDDHDQAAVRFLKVSHGMDGDMATS
DSGKFDWPRIVLKVNPMVVHSILERVPAEEEEEAEGLSPEEEEGGAHSLKDVCDFGKREP
SPFSSRRVMYENEEMVMPGDVAEMTEFQEKTMSNSRYILELSLPNIELALPNKAFYEKLH
NRINNDLLLWEPTAPSPVETFENMSYGVGLSVASQLINTYIKDSFSQFRSSAPDEEESGS
EEETMQYYSTGDFGFRCRRKKNNEPQNKTSQSLFSVLLSVNHGLVALQTDTKREDGTVIE
GRHGEFWLEIDNGVLFSVTRYEGYEDQHYICLHTNSLCLYHQGMLEGTVPSTEVKLPSKT
RPHWLEPTIYRSEEGSLSKRCVPEGAGGETINMLSVAVKIYSENIERNVKEFLISVGVKG
ATLQHQVVPSSISWQEQILDFLNVSDEPVLGYTPPVSVTTFHLHLWSCSLDYRPLYLPIR
SLVTVETFSISSSVSLDRSSSTLRIILDEAALFLSDKCNTVSVNLNRDYVQVVDMGLLEL
RITAVKPGVNGEMTEPRFELRCSSDVIHIRTCYDSCAALMNLIQYIASYGDLIPPPGTET
KAGGSKQRGRPDIPSRPPSRPLLLPEAEQQILQDLMSEAMEDTDFQQARSPEDRQPNGVH
EGFTQALEPPRSDLFLFPDESGNISQEPSPPFTPYHHPLIYAAMSDAAPESDDFCILETP
LAGAADRDEEPVVNKLTSDSIEIQENHFSIPLGRTDSNKGPLHFPVPEVRYLIKEISIIW
HLYGGKDFAGGPVLSSPAKSPGCTPHSSPSQTPVRQSRVAGRAHGGRGRNPDVLMEIQLN
KVKFQHEVYPQSGADREPSLTEQPVSRQVFIVQDLEIRDRLATSQMNKFLYLYFSKEMPR
KAHSNMLTVKALHVCPESGQAPQECCLRVSLMPVRLNIDQDALFFLKDFFASIAAEVELL
SPTDQEVKKPPAPDLTCSFPKHMSGSLDPAPIISVPGQGRPSQNGLPGSSSTENGEAESS
HATSFTDQRIFFREFRFISEVPIRLDYHGKHVSMEQGTFAGIVIGLTQLNCSELKLKRLC
YRQGLLGVDKLFSYAISEWLNDIKKNQLPGILGGVGPIHSLVQLVQGLRDLVWLPIEQYR
KDGRIVRGFQRGAASFGTSTAMAALELTNRMVQTIQAAAETAYDMVSPGPDESESKRIKR
FSHYRLAHQPVDLREGVAKAYSVVKEGITDTALTIYDTATREHEQRGVTGAVGGVLRQIP
PAVVKPLIVATEATSNVLGGMRNQIRPDARQEESQKWRLGEE
NT seq
6249 nt
NT seq
+upstream
nt +downstream
nt
atgccttggccattttctgagtcgataaaaaagcgggcctgcaggtacttgttgcaccgg
tatctgggcaacttcctgcaagagaagctgagcctggatcagctgagcctggacctctat
cagggaaccggatcactggcgcaagtcccattggacaaatggtccctgaatgagatcctg
gaatcggtggacgctccctttgaggtgattgaggggtttattcagacaatctccctgtct
gtcccctgggcctcactgctgcaggagaactgtgctctggaggtgaaagggctcgaggtg
gtttttaggccaagaccacggatggcatccggatctgagccgatgtactggtccagtttc
atgacaagtagcatgcagcttgctaaggaatgtctgagtcagaggctgacagatgagcag
gcagaagggtttcagcctctagaagggcttgagaaatttgcagaaaccattgaaacagtt
ctgagaagagtcaaggttacatttttagacacagtcctcaggattgaacatgtaccagaa
aactcaaaaactggaatagctcttgaaatgcgaatcagcaaaattgtgtattgtgatgaa
actggagatgaatgctctgggatgaatgttcaccagccaacgatgtttgctcataagaac
ctgcaacttactggggtctcagttttttgggatgaattttcagaagctgcaagaacttgt
ccaaagtcctcaactccgcaaacagaaacagaaccaaagctctctcccagctggaacccc
aaaatcatctgtgagccgcacccccagtttacaagaactgtatctgaagtggcaccattc
aaacctgtgcagattggatgtttgaatgggagaatggaactcggtcttattcttaaacaa
aatgaagcacttcctggagcgaaactggatgtagatggacagattgattctataaatgtg
ctcttgtctccacgccaagtgcatctgctcttggacatgctgggtgtcttttcaggacca
gagagttcagagaggacctctctcagctgtaaggacaggaaaagccgcccaatccagcaa
gaggacgagtaccggctgcacatggagctgcaccgctttctgaagaaggacccgctgggt
gcaggggggctggaggagcagggcctgtttgagagcgagacgagaaccacgtcaagtcgg
gaagaagatgtattcttctctatggcagaaatggaaatgtcccacagtctgtcctccctt
ccaccacttggagacccacccactgtggatcttgaactgtctttaaacagtaactacgcc
agctctcccggaggatccccattgggtaatgtaacaacggtttgggatgactacctggat
cctccgagacacagggaaaaactggcacaggaccctcccttcctatcaagagggatgcag
cctcctcagaaactgcttcgacagacatctcacccatctaaacctcactctgtggatgaa
tcccggcctgaggttgtgttcagactagccctgggcagcctgtccgtgtctgtccttcat
atagaccctctgccgccccctgaaacagcactgaacctcaacccgctcactccgatggcc
tccgatttcttcagccggattgagaaaatcagtcctgcagagctctgcaaaggagatttt
ccacattttcatcccatttttgatgaggcctgtccttacgatcacctgaggttcatggga
actggtatcaaggtaacctacgagcagcggcagggttccagtttgcgcagtctcagtact
gatgtgtctgtgggacagattgagctgctggagtgtctattcccaacagactcaaggtcc
agcgcaccccagtacacagagcttgtaacatttgattcagactgcctcaaagaatcccgt
cctccagcttgtcttcaccttctctacaagttttctgaacgcaggggaccccagggaagt
caggtgcgactcagctcattgcctcagaaagctgattttcagatagaactgggtccagtt
cattcagaattagatattagcattgtggatagactcaattccttactgcaaccacagaaa
ctggtaacaacagaaatgatggcatcccacatgtacacctcctacaataagcatgtcagc
ctgcacaaggcattcactgaagttttcctagacgactcgaggacaccagcaaactgccgg
atgtctgtcttggttaatgtgccagtgttaaacttggccgtgcgatttccaattcctgac
ttgaggtcggaccaagagaggggcccctggtttaagaaatccctccagaaggagattctc
cacctggagttcaaggatgtggaattcaaaaccgaattcactggcggatcctctccagaa
caaactaaactggagctgacgtttaaagaactgactggcaagtttcaagatgaccatgac
caggcagctgtcaggttcctcaaagtgtcacatgggatggatggggacatggcgacatca
gacagtggcaaatttgattggccaaggatcgtgttgaaggtgaacccgatggtagtgcac
tctatcctggagcgtgtcccagccgaggaagaggaggaggctgaggggctctccccagag
gaggaggaaggaggggcgcactctttgaaagacgtctgtgattttggaaagcgagagccc
tcgccattctcctcacgcagggtcatgtacgaaaacgaggagatggtcatgccaggagat
gtggctgaaatgactgaatttcaggagaagacaatgagcaattcacgctacattttagag
ctgtcgttgccaaatattgaattagccctgccgaacaaggccttttacgagaaattgcac
aacagaatcaataatgacctgttgctgtgggagccgaccgcaccatctccagtagagacc
tttgaaaacatgtcctatggtgttggactgtcagtagcgagccagctaatcaatacctac
atcaaggacagtttcagccagtttagatcatctgcccccgatgaggaagagagtggatcg
gaggaagagacgatgcaatattactccacgggagactttgggtttaggtgtcgaaggaag
aagaataatgagcctcagaacaaaacctcccaaagtcttttctctgtccttctgagtgtc
aaccatggacttgtggccttacagacagataccaagcgggaagatgggactgtgatagaa
ggcaggcatggagagttctggttagaaattgataatggggttctgttcagtgtgactcgc
tatgagggctatgaagaccagcattacatatgtctccataccaacagcctgtgtctgtat
catcaaggtatgttagaaggaactgtccccagcactgaagtgaagttgcccagtaaaacc
cggcctcactggttggaacctaccatttaccgctctgaggaggggtccctcagcaaacgt
tgcgtgcctgaaggtgctggaggagagactataaatatgctgtctgtggcagtgaagatc
tactctgagaacatcgagcgcaatgttaaggagttcctgatctctgtcggagtgaaagga
gctactcttcagcaccaggtggtgccctcaagtatcagctggcaggagcagattctagat
ttcctgaatgtgtctgatgagcctgttttgggatacacccctcctgtttcagtcaccacc
tttcaccttcacctgtggagctgttctcttgattacagaccactgtacctgccaatcaga
tctcttgtcactgtggaaacctttagcatctccagcagtgtctcgcttgaccggtcctcc
tccacactcagaatcattctggatgaagctgcgttatttttatcagacaagtgtaacacc
gtgtcggtcaatctgaacagagattatgtgcaagtggtggatatgggactcttggagctg
aggattacagcagttaaacccggagtcaatggagaaatgactgagccacgatttgagctg
cgctgctccagtgatgtcattcacatccggacttgctatgactcttgtgcggcactcatg
aacctgatccaatacatagcaagctacggggaccttattccacccccaggaacagagaca
aaagctgggggctctaagcaacgaggcaggcccgacatcccaagcagacccccctctcgg
ccactactcctccctgaagctgagcaacagatccttcaggacctgatgagtgaagccatg
gaggacacagacttccagcaggcacggtcccctgaggaccggcagcccaatggagtccat
gaaggattcacacaggctctcgagccacctcgttcagatctcttcctgttcccagatgag
agtgggaacatctcccaggaaccaagcccaccctttacaccctatcaccaccctctgatc
tacgcagccatgagcgacgctgctccagagagtgatgacttttgtattctggaaactcct
ttggcgggcgctgctgatcgtgatgaggagccagtagtgaacaaactgacttcagattct
attgagatacaagagaatcactttagtatcccacttgggaggactgactcgaataaagga
cccttgcactttcctgttccagaggtcagatatttaataaaggaaatctcaatcatctgg
catctctatgggggcaaggattttgcaggtggaccagtcctatcatccccagccaagagt
cctggctgcactcctcacagctctccctcacagaccccagtgagacaaagtcgagttgct
gggcgtgcacatggaggcagggggagaaacccagatgttctgatggaaatacagctgaac
aaggtgaagttccagcatgaagtttaccctcagagtggggcggacagggagcccagttta
acagagcagccagtctcccggcaagtgttcatcgtccaggatctggagatcagggaccgt
ctggccacgtcacaaatgaacaagttcctctacctctacttcagcaaagagatgcccagg
aaggcccattctaatatgctgacggtgaaggctttgcatgtctgtccagaatcaggtcaa
gccccacaggagtgctgtttacgagtctctctgatgccagtgcgcctcaatatcgatcag
gatgcattgtttttcttgaaggacttttttgctagcattgctgctgaggtggagttgttg
tctccaacagatcaagaagtaaagaaacctccagctccagacctcacctgcagcttcccc
aaacacatgagtggtagtctggacccagctccaatcatctcagtgccaggacaaggcaga
ccgagccagaatgggttaccaggttccagcagcactgaaaatggggaggccgaatcttca
catgcaacatccttcacagaccagcgaatcttcttccgagagtttcgtttcatctctgaa
gtgcccattcgtttggattatcacgggaagcatgtgtcaatggaacagggcacatttgct
ggaattgtgattggtttgactcagctgaactgctctgagctgaaactgaagaggctttgc
tacagacaaggattgctgggtgtggataaactgttctcctatgcaatcagtgaatggctg
aatgacattaaaaagaaccagctaccaggaattctgggaggagtgggccctatacactcc
ttggtacaattagttcagggcctgagggaccttgtgtggttgccaattgaacagtaccgc
aaggatggaagaattgtcagagggtttcaacgtggcgctgcatccttcggtacatctact
gccatggcagctttggagctcactaatcggatggtgcagacaattcaggctgcagcagag
acagcctatgacatggtgtctcctggacctgatgaaagcgaatcaaaaagaatcaaacga
ttctctcattaccggttggctcaccagccagtggatctgcgtgagggcgtggccaaagca
tacagtgtcgtcaaagaggggattacagacacagcgctgacaatctatgataccgccaca
cgggagcacgaacagagaggagtgactggggctgtggggggagttttgcgacagattcca
cctgctgtggtcaaaccactcattgttgccacagaggccacctccaatgttttgggtggc
atgagaaatcagattcgaccagatgcccgtcaggaggaatcccagaaatggcgattaggg
gaggagtga
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integrated database retrieval system
