Polyodon spathula (Mississippi paddlefish): 121324199
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Entry
121324199 CDS
T07273
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121324199
04082 Neuroactive ligand signaling
121324199
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121324199
Ion channels [BR:
pspa04040
]
Ligand-gated channels
GABA-A
121324199
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
121324199
NCBI-ProteinID:
XP_041121731
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Position
1:complement(91584691..91607928)
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AA seq
556 aa
AA seq
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MVIAMSSRNVSTLIYFLCVTACIRKTLGHIKKDEKLYPENFTRILDRLLDGYDNRLRPGF
GGPVTVVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDKRLKYEGPIEILRLNNLMVTKV
WTPDTFFRNGKKSVSHNMTAPNKLFRIMKNGTILYTMRLTISAECPMRLVDFPMDGHACP
LKFGSYAYPKTEMIYTWKKGPENSVEVPQESSSLVQYDLIGQTVSSETVKSITGEYIVMT
VYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISAR
HALPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNNQTEKAKKKTVKSSSAPRASPA
KKASDTEVLQNPGTNGNLRKRMNYMTLPDDNSGQRTDTGSNTKGGVTRQSLVGQVPSVVA
PPSFSHSSPNPFSYVNVPPPVLTSQNTLTSGSTPPAPPSSPTLPSRISTNTIDGPASIHH
LLAPKLEHIQATATKMEASLKQSSTSSALPAPSLPGSGTSKIDKYARILFPVSFGAFNMV
YWVVYLSKDTMETTES
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggtgattgcgatgtcctccaggaacgtttccacactaatttactttctctgcgtgaca
gcctgtataaggaaaaccttaggacatataaaaaaggatgagaaattatatccagaaaat
ttcacacgcatactggaccgacttctggatggttatgataacagactgcgacctggtttt
gggggtccagttactgtagtcaaaactgatatatatgtgacaagctttggacccgtatca
gatgttgaaatggaatatacgatggacgtcttctttcgtcaaacttgggtagacaagaga
ttaaagtatgaaggtcccattgaaatattaaggctaaacaacctaatggtcacaaaagtg
tggacacctgatactttctttagaaatgggaaaaaatctgtctcacacaacatgacagcc
ccaaacaagttatttcgaatcatgaaaaatgggaccattctctacacaatgaggcttact
ataagtgcagagtgcccgatgagacttgtggatttcccaatggatggacatgcttgccct
cttaagtttggaagctatgcttatccgaaaactgagatgatttatacttggaaaaaagga
ccggaaaactcagtagaagtcccccaagagtcttcaagtttggttcaatatgatctaatt
ggacagacggtgtctagtgagactgtaaagtctattacaggtgaatatattgtgatgaca
gtatatttccatttgaaacgcaaaatgggctactttatgattcagacgtatataccgtgc
attatgacagtaatcctctctcaagtatcattttggattaataaagaatccgtccctgct
agaaccgtatttgggataacaacagttttgacaatgacaacactaagcattagtgcaagg
cacgccttgcctaaagtctcatatgccacagcaatggactggttcatagctgtgtgcttc
gcctttgtgttttctgctctcattgagtttgctgctgtcaactacttcacaaataatcaa
actgaaaaggccaaaaagaagacagtgaaatcttcatctgcacctagagcttctccagcg
aagaaagcaagtgacactgaagtacttcagaatcctggtacaaatgggaacttgaggaaa
agaatgaactacatgacactgccagatgacaacagtggccagagaactgacactggaagc
aatactaaaggtggagttacaagacaatctttagttggtcaagttccttctgtagtcgcc
ccaccatctttttctcactccagccctaacccattcagttacgtaaatgtacccccacca
gttttaacatcacaaaacactttaacttcaggaagtaccccgccagcaccgccctcatcc
ccaaccctgccgagtcgcatatcgacaaacacaattgatggaccagcttctattcaccac
ctgctcgctcccaaacttgaacatattcaagcaactgcaactaaaatggaagcaagtcta
aaacaatcctccaccagctctgcactgcctgctccttcactgcctggttctggaacaagt
aaaattgacaagtacgcacgtattctgtttccagtttcttttggggcttttaacatggtt
tattgggtagtctacttatcaaaagacaccatggagacaacagaaagttaa
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