Polyodon spathula (Mississippi paddlefish): 121324201
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Entry
121324201 CDS
T07273
Name
(RefSeq) C-type mannose receptor 2-like isoform X1
KO
K06560
mannose receptor, C type
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121324201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121324201
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pspa04054
]
121324201
04090 CD molecules [BR:
pspa04090
]
121324201
04091 Lectins [BR:
pspa04091
]
121324201
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Phagocytosis
C-lectin receptors
121324201
Pattern recognition receptors [BR:
pspa04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
121324201
CD molecules [BR:
pspa04090
]
Proteins
121324201
Lectins [BR:
pspa04091
]
C-Type lectins
Others
121324201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
CysR_MRC2_N
fn2
UL45
Chordopox_A33R
Yip1
Motif
Other DBs
NCBI-GeneID:
121324201
NCBI-ProteinID:
XP_041121730
LinkDB
All DBs
Position
12:40583831..40643762
Genome browser
AA seq
1465 aa
AA seq
DB search
MKRIDQQTYFLWTGFIFCKFTLYFCILSLGLRTANADSGVFLIFSDELQGCLETMGTALR
LSRSCNESNPAQQWIWVSRRRLFNLGSTKCLGLSGTNTSSPELSMYKCDREYYMVWNCNS
LGEKISQHISPGNTSLSPSDRIDQARDSQWRVYRTNQDLCSKPYHEIYTIQGNSHGKPCT
IPFKYDNQWFHECTSTGREDGHLWCATTVDYGKDERWGFCPVKSPGCETFWDKDPMTNSC
YQFNFQSTLSWSEARVSCQQQGADLLSINEIHEQTYINGLLTGYSSSLWIGLNDLDINGG
WQWSDASPLKYLNWEADQPDNSEEESCGVIRTETSGRWQNKNCDMALPYVCKKKPKTAPN
STTETYRRMECDGSWQQFQSSCYLCNNEKMSWQEARQACHKMEADLVSIHTLLELEFVVK
SMKRDVDELWIGLNDGKQQMNFEWSDGSQVHFTFWHPFEPNNFGNNREDCVTIWGPEGRW
NDSPCNMTLPSICKKEGRQTDKKEEDHECKKGWKWHSPSCYWLGEELLSFEEARKTCSIK
ESNLVTITNRFEQAFVSSLVYRRTNDLIWTALHDQNGTGSFRWLSGDEVMYTNWNRDQPG
YSKGGCVVLATGSSTGLWEVKDCKSRAKYICRQNQDTSVSPELPVPVPTPSLTGTCPRGW
STSSSLHHCYKVFHYVGVQDKLSWLQAHLFCREQGAQLLSIASFEEEQFVSQILHELFGE
SDDHEQHWFWIGLNRKNPLDNWSWKWSDGLGYSYHNFGRYHHEDDFRQCAVADLGTMQWL
AMQCESELDWICKIPKGTDVKEPEINEENGSKEWMRFQDVEYKFFDHHSTWMQAQRICTW
FGGYLASIHSQEELDFLGKALLKRPKAQNQHWWIGMHTYENDGRFRWSDRSILNFVSWAQ
EKPRPVSREKKCVYMMPKSEEWGDQKCFTDLPYICKRTNTSSHISPLPPAPTPAPGGCPK
GWLPFINKCFKIYGWNGNDRATWPAAKGACERQESALATISNHLEQAFITTLLPNVTFDL
WIGLQDSKQDFQWTEEPLKYVNWAPGKPSGHRDNVSTKTTAMNCAVIWHGAPPHYTGHWD
DRNCAQEKNGFICQKYKNQYIIPASVDAFPPPPSSPLHYRNHTYRIVKKPLSWEEAVLLC
ESRNSSLASIHDPYQQAYLTQLINGLDKPLWIGLYKDRGWSFSWLGENTVTYSSWQDGEP
TRTSGCGYMGVDGLWNTISCETKLQGAICLINTEPAKSHKWSYSGDCPHSLKDSSWVPFR
DSCYSFHLESRTTPTEAAKKCRGVGATVLSIVDETENVFVWEHIQDYEWQSSGAWLGMTF
NPKVGSLVWPDSSVVEYSNWGQQDSHHSMLSPNTCFWVQSNNGVWGLGSCTNVTRGIICK
MPRVIDTSYSKSSVQDNTTVIVVVVMAMVALCLFMAAIIYLYRKRAGGGRGAFESARYSR
TTSTPTEATEKNILVSDMEMNEQPE
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcatcgaccaacaaacctattttctgtggaccggcttcatcttctgcaaattc
acgttatatttctgcatccttagtctgggactaaggacagcaaatgcagactcgggtgtg
ttcctgatcttcagtgatgagctgcagggctgcctggagacgatgggcacagcgctgcgg
ctgtcccgctcctgtaacgagtcaaacccggcgcagcagtggatctgggtgtcgcggaga
cgcctctttaatctgggctccacaaaatgcctgggtctctcaggcaccaacaccagcagc
cccgagctgagcatgtacaaatgcgaccgtgagtactatatggtctggaactgcaactcc
ctgggagagaagataagccaacacatctcccctggcaacacctcactcagcccctcggac
agaatagaccaagcccgcgacagccaatggagggtttacaggaccaaccaggacctgtgc
tccaagccttaccatgagatctacaccatccaaggaaactcccatggcaagccgtgcacc
atccccttcaagtatgacaatcagtggttccacgagtgtaccagcacgggccgagaggac
ggccatctctggtgtgctaccactgtagactatggcaaggacgagcgctggggcttctgt
ccagtcaagagccccggctgtgagacattctgggataaggatccgatgaccaacagctgc
taccagttcaatttccaatcaacattgtcgtggagcgaggcgagggtcagctgtcaacag
cagggggctgacctgctgagcattaatgagatccacgagcagacctacattaatggcttg
ctgactgggtacagctcctccttgtggattggcctcaatgacctggacatcaacggcggt
tggcagtggtcagatgcttctcctctcaaatatctcaattgggaggcagaccagccggat
aactctgaggaggagagctgtggcgttatccggaccgagacttccggtcgctggcagaac
aaaaactgtgacatggcattgccctacgtttgtaagaagaaacccaaaacggccccgaac
agtactacagagacttaccggaggatggagtgtgatggatcttggcagcagttccagtcc
agctgttatctttgcaataatgagaagatgagctggcaggaggcccgccaagcctgtcac
aagatggaggctgaccttgtgagcatccacaccctgctagagctcgagtttgtcgtgaag
tccatgaagcgcgatgtggatgagctgtggatcggtctgaacgacggcaaacagcagatg
aacttcgagtggtctgatggcagccaagttcacttcaccttttggcaccccttcgagccc
aacaacttcggcaacaacagggaggactgtgtgaccatctgggggcctgagggccgctgg
aatgacagcccctgtaacatgacgctgccatccatctgcaagaaagagggccgacagacc
gacaagaaggaagaggaccacgaatgcaagaagggttggaagtggcacagtccgtcttgc
tattggttaggagaggagctcctgtcctttgaggaagcgcggaagacatgttctatcaaa
gagtcgaaccttgtcaccatcaccaacaggttcgagcaggcctttgtcagcagtctggtc
taccgccggacaaacgatttaatctggaccgcactccatgaccagaacggaaccggctcg
ttccgctggctcagtggcgatgaggttatgtacaccaactggaaccgggaccagccagga
tacagcaaaggtggctgtgtggtcctggcaacaggcagctccacaggtctgtgggaggtg
aaggactgtaaaagcagagccaagtacatctgcagacaaaaccaggacacttcggtgagc
ccagagctccctgtgcccgtgcccaccccgagtctaaccgggacctgcccaagaggctgg
agcacttccagctccctgcaccactgctacaaggtgttccactacgtgggggtccaggac
aagctgagctggctccaggcccacctgttctgccgagagcagggcgctcagctcctcagc
attgccagcttcgaagaggagcagtttgttagccagattctgcatgaactctttggggag
tcagacgaccacgaacagcactggttctggatcggactaaatcggaaaaacccattggac
aactggagctggaagtggagcgatggcctggggtactcctatcataactttggccgctat
caccacgaggatgatttccgacagtgcgcggtggcagacttgggcaccatgcagtggctg
gcaatgcagtgcgagtctgagctcgactggatctgcaagatccccaaggggactgacgtg
aaagagccagaaattaatgaggaaaatggctcaaaggagtggatgcgtttccaggatgtg
gagtacaagttctttgaccaccactctacctggatgcaggcccagcgcatctgcacctgg
tttggcgggtatctcgcctccatccacagccaggaagagcttgactttcttgggaaggcc
ctactcaagcgacccaaagctcaaaaccagcactggtggattgggatgcacacctatgaa
aatgatggccgcttcaggtggtctgaccggtctattctgaactttgtgtcctgggcacaa
gaaaagcctcgtcctgtctccagagagaagaagtgtgtgtacatgatgcccaaaagtgag
gaatggggtgaccaaaagtgcttcactgatttaccgtacatttgcaaacggaccaacaca
agcagccacatcagccccctgcctccagcaccgacgcctgcccctgggggctgcccaaag
ggctggcttccgttcatcaataagtgtttcaagatctatgggtggaatgggaatgataga
gccacatggccggcagcaaagggagcatgtgagcgacaggaaagtgcactggccaccatc
tccaaccacctggagcaagcttttatcacaaccctgcttccgaacgtgaccttcgacttg
tggatcggccttcaggattccaaacaggatttccagtggaccgaggagcctttgaaatac
gtcaactgggcccctggcaaaccttcaggacaccgggacaacgtgagcacaaaaacaact
gctatgaattgtgctgtgatttggcacggagccccaccacactacacaggccactgggac
gacaggaactgtgcacaggaaaaaaatggcttcatctgccagaaatataaaaatcagtat
atcatcccagcctctgtggatgccttccccccaccccccagctcccccctgcattaccgc
aatcacacgtaccgcatcgtgaagaagccgctgagctgggaagaggctgtgctgttgtgt
gagtctcgcaactcctcgctggccagcatccatgatccataccagcaggcctacctcacc
cagctcatcaatggcctggacaagccgctgtggatcgggctttacaaggacaggggttgg
agcttctcgtggctgggggagaatacggtgacctacagcagctggcaggatggcgagccg
accaggacctctggttgcggctacatgggtgtggatgggctgtggaacacaatctcctgc
gaaaccaagctgcagggcgccatctgtctgataaacacagagccagccaagtcccacaag
tggagttactctggagactgcccacattccctgaaggactccagctgggtcccgttccga
gattcgtgctactcctttcatctggagtcccgtaccacccccacggaggcagccaagaag
tgccgaggagtgggagccacggtcctgtccatcgtggatgaaactgagaacgtgtttgtg
tgggagcatatccaggactacgagtggcagtccagcggggcctggctggggatgaccttt
aaccccaaagtgggcagcctggtgtggccggacagctctgtggtagagtactcaaactgg
ggccagcaggactcccaccatagcatgctgagcccgaacacctgcttctgggtccagagc
aacaacggggtctgggggctgggctcttgcaccaacgtcacacgaggcatcatctgcaag
atgccacgagttatagataccagctattctaaatcctcggtccaggacaataccacagtg
attgttgtggtagtcatggcaatggtggcactgtgcttgttcatggcagccatcatctac
ctataccggaagagagcaggcggaggccgtggggccttcgagagcgctcgctacagccgc
accacatccacccccaccgaggcaaccgagaagaacatcctggtgtctgacatggagatg
aacgagcagcccgagtaa
DBGET
integrated database retrieval system
