Polyodon spathula (Mississippi paddlefish): 121324204
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Entry
121324204 CDS
T07273
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121324204
04082 Neuroactive ligand signaling
121324204
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121324204
Ion channels [BR:
pspa04040
]
Ligand-gated channels
GABA-A
121324204
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
OAD_gamma
Cas9_RuvC
Motif
Other DBs
NCBI-GeneID:
121324204
NCBI-ProteinID:
XP_041121746
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Position
1:91622223..91756994
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AA seq
477 aa
AA seq
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MWRVQDRGCFGILSFPMMVAVVCCAQSVNEPSNMSYVKETVDKLLKGYDIRLRPDFGGLP
LDVGMSIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLSYSGIPLNLTLDNRVADQLWVPD
TYFLNDKKSFVHGVTVKNRMIRLHPDGSVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIEFYWKGGETAVTGVANIELPQFSIMDYKMLSTKVKFTTGSYPRLSLSFQLK
RNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKI
PYVKAIDIYLIGCFVFVFLALLEYAFVNYIFFGRGPQLQKKATEKAAKANNEKSKLETNE
VQVDAHGNILLNTLEIRNEVSGSEVLTSINDPRATMFSYDSASIQYRKPMTSRDVYGRNA
ADRHVVHKKGRLRRRTSQLKIKIPDLTDVNAIDKWSRIIFPITFTFFNVVYWLYYVH
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtggagagttcaagaccgtggatgtttcgggattttatcttttcccatgatggtggcc
gtggtctgctgtgcacaaagcgttaatgagcccagcaacatgtcatatgtgaaagaaacc
gtggataaattgctcaaaggatatgacattcgcttaaggcctgattttggaggtctccct
ttagatgttggaatgagcatagacatcgccagcattgatatggtctcagaagtcaatatg
gattatactctcacaatgtactttcaacagtactggagggacaaacggctttcctactct
ggaatacctctcaacctgacactagacaacagagtggcagatcagctgtgggtgcctgat
acctacttcctcaatgacaagaaatcgtttgtgcacggcgtcactgtaaaaaacagaatg
atccggctgcaccctgatggatccgtgctctatggactcagaattaccactacagcagca
tgcatgatggatctgcgcaggtatccccttgatgagcagaactgcactctggagatagaa
agctatggctacactactgatgatattgagttttactggaaagggggagaaactgcagtc
acaggagtcgccaacattgaattgccacagttctccatcatggattataaaatgctgtcc
acaaaagtgaagttcacaacaggatcgtatcccaggttgtcactcagttttcaactgaaa
agaaacataggctacttcatcttgcaaacatacatgccttcaactctgataacaattcta
tcctgggtgtccttttggatcaactatgatgcttctgctgcaagagttgctttgggaatt
acaactgtgctgacaatgacaaccatcaacactcatctcagggagactctgcctaagatc
ccttatgtaaaagccattgacatttacctgatcgggtgttttgtgtttgtgttcttggcc
ctcctggagtatgcctttgtgaactacatattctttggaaggggacctcagctccaaaag
aaggccacagaaaaagctgcaaaggccaacaatgagaagagtaaactagaaaccaacgaa
gtgcaggttgacgcccatggaaacatccttctaaacaccctggaaatcagaaacgaagtt
agtggctctgaggttttgacaagcataaatgaccccagagccactatgttttcttacgat
agtgccagcatccagtacagaaagccaatgacaagccgtgacgtctatgggaggaatgca
gcagacagacatgtcgttcataaaaagggtcgcttacggagaaggacttctcaacttaaa
atcaagattcctgatttgactgatgttaatgccatagacaagtggtccagaatcattttt
ccaatcacatttacattttttaatgttgtctactggctttattatgtgcattag
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