Polyodon spathula (Mississippi paddlefish): 121324213
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Entry
121324213 CDS
T07273
Name
(RefSeq) tetratricopeptide repeat protein 7B isoform X1
KO
K21843
tetratricopeptide repeat protein 7
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121324213
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
121324213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC7_N
TPR_2
TPR_8
TPR_14
TPR_1
TPR_17
TPR_16
TPR_19
TPR_12
TPR_CcmH_CycH
ANAPC3
TPR_9
TPR_11
TPR_15
TPR_10
TPR-S
ARM_TT21_C
Iml2-TPR_39
Suf
NatA_aux_su
ARM_TT21
SPO22
Dus
Motif
Other DBs
NCBI-GeneID:
121324213
NCBI-ProteinID:
XP_041121778
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Position
12:complement(7890609..7925410)
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AA seq
895 aa
AA seq
DB search
MTAKKSGSRLETEIERCRSEGQWDRIPDLIRQLSVKLIANDDLAELLLGEAKLQQYLKEN
PIKQGASPRGAKPKLMEVRKHLTAALDRGNLKSEYMQEASLIMAKLNYVEGSYREALSNY
FKVGLDDLQLVGIPVYRLSMIAEAYATKGLCLEKVPVASPVSNRHTGREQEIITCYEKSG
DIALLYLQEVEKALSSGIQNRSPKPGPISHEQELGFFLETGLQRAHVIYFKNGNLTRGVG
RFREILRAVETRTTQNLRMTIARQLAEILLRGMCEQSYWNPLQDPPHQSPLDDPLRQASN
IEDYALSRRPKVYAGENIFCPQENTEEALLLLLISESMANRDAVLSRIPEHNNDRIISLQ
SASIVYDLLTIALGRRGQYEMLSECLERAMKFAFEEFHLWYQFALSLMAAGKSARAVKVL
KECIRLKPDDPTIPLLAVKLCIGTLHWLEEGERFAKMVIDMGEKASEFRPKGYLAIGLVY
SLKATDASLRGVQEEYQRKALGAFQRAQSLSPMDHLAAFYLALQHAVSRQIPEAVGYVRQ
ALQLQGDDVHSLHLLALLLSAQKHYHDALNIIEMALSEYPEHFILLFTKVKLESVCKGPD
EALLTCKHMLQIWKSCYNLTNPSDSGRGSSLLDRAMADRRQINNMTLPDFSDPETASSSS
SSISGSEPSLHFFISSHHSPHSKSDPTPKPSSRHFCDHAPGRRASSPCSVHATSVAASRV
EQALSEVASSLQSSAPKQGPLHPWMTLAQIWLHAAEVYTGIGKPAEATACIQEAANLFPT
SHNVLFMRGQVAELRGNTDEAKRWYEEALSISPTHVKTMQRLGLILHRLGRSSLSEKILR
DAVQVNPTSHDVWNSLGEVLQTQGHDDAATECFLTALELEASSPILPFTIIPRAL
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgaagaagtcggggtcacggctggagacagagatcgagcgctgccgctctgag
ggtcaatgggacagaatcccagatcttattagacagctgtctgtcaaattaatcgcaaac
gatgatttggctgagctattgttgggggaagcaaagcttcagcagtacctcaaagagaac
cctatcaaacagggagcgagccctcgcggagccaagccaaagctgatggaagtcaggaaa
cacctgacagcagctcttgacagaggaaatctaaagtctgagtacatgcaagaggccagt
ttaataatggccaagctgaactatgtggaaggcagttacagggaggctctcagcaattac
ttcaaagttggccttgatgatctgcagctggttggcatccctgtttataggttgtcaatg
atcgctgaagcatacgcaacaaaaggtttgtgcctggaaaaagtgccagtggcatccccg
gtcagtaatcgacacactggtcgtgaacaggaaatcattacttgctatgagaaatcaggc
gacatcgcactgctgtacctgcaggaagtggagaaggctctgagcagtgggattcagaac
aggagtcccaagccaggcccaatctcccatgaacaggaactgggatttttcctggaaaca
gggcttcaaagagcacacgtcatttacttcaaaaatggaaacttgacaagaggggttgga
aggtttagagagatcctgagagcagttgaaacaagaacaacacagaacttgagaatgaca
atcgctaggcagttagctgagatcttgttaagaggaatgtgtgaacagagctattggaac
ccgctgcaggaccctccacatcagtcacccttggatgaccctctacgacaggcatccaac
attgaggactacgccctcagtagaaggccaaaggtgtatgccggagaaaacatattctgt
cctcaggaaaacacagaagaagccttgttactgctactaattagtgaatcaatggcaaac
agagatgctgtgctaagcagaattcctgaacacaacaatgatcgtattattagtttacaa
agtgcctctattgtgtatgatctactgacaattgcacttggtagaagaggacaatatgaa
atgctgtctgagtgtctggagagagcaatgaagtttgcatttgaggagtttcacctttgg
taccagtttgctttgtcccttatggctgcaggaaagtcggcacgtgctgtgaaagtcctg
aaggagtgcattcgcctgaaaccagatgacccaactattccgcttcttgctgtcaagtta
tgtattggaacattgcactggttggaagaaggagagcggtttgccaaaatggtgattgat
atgggggaaaaggcatcggagttcagacccaaaggttacttagccattggtcttgtgtac
agcctaaaagccaccgatgcatccttgcggggagtacaggaagaatatcagcggaaagct
cttggtgcttttcaaagggcccaaagtttgtctccaatggatcatcttgctgcattttac
ctggccttgcagcatgctgtatccagacagattccagaagctgtaggctatgtccgccaa
gcgctccagctccagggagatgacgtgcactccttgcatctcttggcccttttactatcg
gcacagaagcactaccacgacgccctcaacatcattgaaatggcactgagcgaatatcca
gaacattttatattgctgtttacaaaagtgaaattggaatcagtctgcaagggtcccgat
gaagcactgttgacttgtaaacatatgctgcagatctggaaatcctgctacaatctcacc
aaccccagtgactctggacgtggcagcagtctattagatagagctatggcagacagaaga
caaattaacaacatgacactgcctgactttagtgacccagaaacagcttccagctcttcc
tcttctatctctggatccgagccttctctccacttttttatttcttctcaccactctccc
cattccaaatctgaccccaccccgaagcccagcagccgtcatttctgtgaccacgcgcct
ggacgccgggcttcctccccttgttcagtccatgccacttcagtcgcagcctcccgagtg
gaacaggccctgtctgaggttgcttcctctctgcagagcagtgctcctaagcaggggcct
ctccatccctggatgactctagcacagatctggcttcatgcagctgaagtctacactggt
attgggaagcctgctgaagccactgcctgcatccaagaagcagcaaacctctttccaacg
tcacataatgttctgttcatgaggggtcaagttgcagaacttcggggcaacacagacgaa
gctaagcgctggtatgaagaggcactatccatcagcccaacccatgtcaagacaatgcag
agattgggcctgattcttcaccggctgggtcggtccagtttgtctgagaagatcctgcgt
gatgccgtgcaggtgaatcccacgtctcatgatgtgtggaacagcctgggagaggtgctg
cagactcaaggccatgacgatgcagcgacagagtgtttccttacagctctggagctggag
gcaagcagccccatccttcctttcaccatcattcccagggctctctga
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