Polyodon spathula (Mississippi paddlefish): 121324217
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Entry
121324217 CDS
T07273
Name
(RefSeq) SNW domain-containing protein 1-like
KO
K06063
SNW domain-containing protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
pspa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121324217
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121324217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121324217
Spliceosome [BR:
pspa03041
]
Complex B
Other components
Prp19-related factors
121324217
Complex C
121324217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
121324217
NCBI-ProteinID:
XP_041121787
LinkDB
All DBs
Position
12:complement(7061143..7066578)
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AA seq
547 aa
AA seq
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MTSDAKFWRKKMSLTSFLPAPTQLSQDQLEAEERSQSQRSRSTALVSSRREPPPYGFRKS
WIPRSLEDFGDGGAFPEIHIAQYPLEMGRKKKTSNALAVQVDAEGKVKYDAIARQGQGKD
KVIYSKFTDLLPKEVANEDDPGLQRPDEEAVQELTEKTRSALDKQVSQKIAAAMPVRAAD
KQAPAQYIRYTPSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPV
LHSPSRKMTVKEQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAE
ALYIADRKAREAVEMRAQVEKKMAQKEKEKKEEKLRELAQMARDRRAGIKGHGDKVAEDG
EARERDEIRHDRRKERQHDRNISRAAPDKRSKLQRDQDRDVSELIALGQPNPRTSNEAQY
DQRLFNQSKGMDSGFAGGEDEVYNVYDQPWKSGRDMAQNIYRPSKNTDKDMYGDNLDTLM
QNNRFVPDKEFSGTDRRQRRDGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSGRSKDYDH
DKKRRKE
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcagacgcaaagttctggagaaagaagatgtcgctaacgagctttttacctgcc
ccaactcagctttcccaggaccagctggaagctgaagaaaggtcccagtcacaaaggtcc
aggtcaaccgcactggtatcatcgcgtagagaaccacctccctatggctttagaaagagc
tggattccaaggtcactggaggactttggagatggcggtgcttttccagagattcacatt
gcacaatacccgctggaaatgggaagaaaaaagaagacttccaatgctttggcagttcaa
gtggatgcagaagggaaggtcaaatatgatgccattgctcggcaaggacagggaaaagac
aaggttatttacagtaagttcacagatttgcttcctaaggaagttgcgaatgaagatgat
ccaggccttcagagaccagatgaagaagctgttcaagagttgacagaaaagactagatct
gctcttgataaacaagtttcacagaagattgcagcagccatgcctgtgcgtgcagcagat
aagcaggcccctgctcagtatattaggtacaccccatcccagcaaggagttgcatttaat
tctggagccaagcaaagggttattcgaatggtggaaatgcagaaagatccgatggaacca
ccacgatttaagatcaataagaaaatcccccgtggacctccatctccacctgcaccagtc
ctgcattcacccagcagaaagatgacggtgaaggaacagcaagagtggaagattccacca
tgcatttcaaactggaaaaatgcaaagggttacacaattccattagacaaacgtctagca
gctgatggccggggactgcagacagttcatatcaatgagaactttgcaaagcttgcagag
gcactctacattgcagacaggaaggctcgtgaagctgtcgagatgcgtgcccaggtagaa
aaaaaaatggctcagaaggagaaagagaagaaggaggagaagctcagggaactggcccaa
atggcaagagaccgaagagctggcatcaaaggccatggtgacaaagttgcagaggatgga
gaggctagagagcgtgatgaaatcagacatgacagaaggaaagagagacagcatgacaga
aatatatctagagcagctccagataaaaggtcaaagctacaaagggaccaggacagagat
gtcagtgaactcattgcgcttggtcaacccaatcctcgcacttctaatgaggcacagtat
gatcagcgacttttcaatcaaagcaagggtatggatagtggttttgctggtggagaggat
gaggtttataatgtgtatgaccagccttggaaaagtggcagggatatggcccagaacatc
tacagacccagtaagaatactgacaaagatatgtatggagacaatctggacacactcatg
caaaataacagatttgtgcctgacaaggagttctctggcactgatcgcagacagcgcaga
gatggcccggttcagtttgaggaggatccatttggtctggataagttcttggaggaagcc
aagcagcatggtggctcaaagcggccatcagatagtggacgttcaaaggattatgaccat
gataagaaacgaagaaaggagtga
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