Polyodon spathula (Mississippi paddlefish): 121324228
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Entry
121324228 CDS
T07273
Name
(RefSeq) rho GTPase-activating protein 5-like isoform X1
KO
K13709
Rho GTPase-activating protein 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121324228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121324228
Membrane trafficking [BR:
pspa04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121324228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP_pG1_pG2
RhoGAP
RhoGAP-FF1
FF_RHG35_4th
FF
Ras
NOG1
GTP_EFTU
Motif
Other DBs
NCBI-GeneID:
121324228
NCBI-ProteinID:
XP_041121817
LinkDB
All DBs
Position
12:complement(9663261..9698111)
Genome browser
AA seq
1508 aa
AA seq
DB search
MAKNKEPRPPTYAISVVGLSGTEKEKGNCGVGKSCLCNRYVRPKADDYYSEHTSVLSTID
FGGRVVNNDHFLYWGEFTYRNDDGLECKIQVIEQTEFIDDQTFQPHRSTNLQPYIKRSAT
AKLQSAEKLMYICTDQLGLEQDFEQKQMPDGKLNIDGFLLCIDVSKGCNRKFDDQLKFVN
NLYAQLAKSKKPVVIAATKCDECVDQYLREIQAFASNKKNLLVVETSARCSVNVDSCFNT
LTQLIDKTRGKPKISPYLDAYKIQRQSVATATDRFEKLIVQTVKDYHTSWKASSHKLKNH
PDYENYINLEGSGKAKNTFCKHIEQLKQEHIRKRKGDYFLTLPRILNNLLSNLDEIEHLS
WLEAQNYLENKPDFPYWFVVLENTPWNETDHIDKVNDRRIPFDLLCTPEGERVYQNHVQH
LISEKKRVEMKEKFKKTLERVQFITPGQPWEEVMCFVMEDEAYKYIGESDRREVYTRHQR
EIVEKAKEEFQEMLFEHAELFYDLDLNATPSCDKMSEIHMVLNEEPRYRALQKLAPDRQS
LLLKHIGFVYHPTKETCLSGQNCIDIKVEQVLANSLVQLDHGHPHFYHDSANIDKVNLFL
LGREGFAQELANEIRAQSTDDEYTLDGRIYELDLQTIDANSTLLLNRFWTPTFKPHGCFC
VFSSIESLNFIGDCIGIIRAEASQNRRDKYVAQLPFILILANQRDSVCKNLPILRHQGQQ
LANKLQCTFVDIPSGTFPRKFNETQIKQALRGILEALKHNFDVMSPLPSIKDMSETDLRI
VMCAMCGDPFSVDLILSPFLDSHSCSAAQPGQNNTLVLDKIIGDSRRRIQITILSYHSSI
GIRKDELVHGYILVYSAKRKSSMAMLRAFLAEVQDVIPVQMVAITDSQADFFENEAIKEL
MTEGEHIATEITAKFTALYSLSQYHRQTEVFTPFFNEVLEKKNNIEGSFLCDSIKDSTNA
SEDVFSQSPHGNSPVYNYYPDSEDDTEAPPPYSPIGDDVQLLPTPSERAKYRIDLEGNEY
PIHSTPVNPHDDRNHKVPPAVRPKPAIPKTTVKKLDPNLVKTIEAGIVKHPRKQSRVPLA
HGEDIEASDNYAEPSDTLLKSKGYRDDIYDVPENSQNRTVKMRNTFGGIHVTHGDEENGF
VRMSESHGGRRPSKYKHRSKILFSKTKAYHQRAHSDASDDETGLSIQKKKKGRGHRGSEE
DPLLSPVDPWKGGIDNPAITSDPEQDDKKLKKKKQPKIKEPKKPKQKATKPLYPPTRRNW
ESNYFGVPLQDLVTLEKPIPLFIEKCVDFIEATGLLTEGLYRVSGNKTDQDNIQKQFDQD
HSVDLMAMDVAVNAVAGALKAFFADLPDPLIPYNLHPELVETAKIVDRTERLQVLKEIVK
KFPSVNYEVFKYVIGHLNRVSHQSRTNFMTADNLSICFWPTLMRPDFENKDTLSTTKLNQ
SVIESFIQQCQYFFYNGEIVETSNPVAAPPPTQMSNAGHMVESLVPLQLPPPLQPQLIQH
QLQADPLV
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaacaaggaacctcgccccccaacatatgctataagtgtagttgggttgtct
ggaacagaaaaggagaaaggcaactgcggagttgggaagtcttgtttgtgcaatagatat
gtgcggccaaaggctgatgattattactcagagcatacctctgtcttgagcacaattgac
tttggaggacgggttgttaacaacgatcactttttatactggggtgagtttacatacaga
aatgacgatggattggagtgcaaaattcaagtcattgaacagactgagtttattgacgat
caaacctttcagccacaccggagtacgaacttacagccctatattaagcggtcagctaca
gcaaagttgcagtcggcagagaagctgatgtatatctgcactgaccagctaggcttggag
caagactttgaacaaaaacagatgcctgatggaaagcttaacattgatggttttctctta
tgcatagatgtgagcaaagggtgcaataggaaatttgatgaccagcttaaatttgtaaat
aacctgtatgcacaactggcaaaatcaaaaaagcctgttgtaatagctgcaacaaaatgt
gatgaatgtgttgaccaatacctgcgtgaaatccaggcatttgcttccaacaaaaagaac
ctccttgtggtagaaacttctgcacggtgcagtgtgaatgttgattcttgttttaatacc
ttgactcagttgatagataaaacaagaggcaaacccaaaataagcccctatctggatgct
tataagatccagagacagtctgttgctacagcaacagacaggtttgaaaagttgattgtg
caaacagtgaaagattaccacacaagttggaaagcttcaagtcacaaattaaaaaaccac
cctgattatgagaattacatcaacttggaaggcagtgggaaggccaaaaacacgttttgc
aaacacatagaacaactgaagcaggaacatatcaggaaaagaaaaggggattattttctg
accctgcctagaattcttaataatcttcttagtaacctggatgagattgagcatttgagc
tggttagaagcccagaattatttggaaaacaagcctgactttccatactggtttgtagta
ttggagaacaccccatggaatgaaacagaccacatagacaaagtcaacgacagaagaatt
ccttttgacctcctttgtacgccagaaggggagagagtttatcaaaaccacgtgcaacat
ttaatttctgagaagaagagggtggagatgaaggagaagtttaaaaaaaccctggagcgg
gttcagttcatcactccagggcagccctgggaagaggtcatgtgtttcgtaatggaggac
gaagcttacaagtatattggcgaaagtgatcgcagagaagtttacactaggcatcaacgg
gaaatagttgaaaaagccaaagaggaatttcaggaaatgcttttcgaacatgcagaattg
ttttatgatttggatctgaatgcaaccccaagctgtgataaaatgagtgaaattcatatg
gttctgaatgaagagcccagatacagggcactacagaaacttgcaccggaccggcaatct
ctactgctaaagcatataggatttgtgtatcatcctacaaaggagacttgtctcagtggc
caaaattgtattgacattaaagttgagcaggtgcttgctaacagtttggttcagttggat
catggacacccacatttttatcatgacagtgccaacattgataaggttaacctgtttctc
ttagggagggaggggtttgcacaggaactggcaaatgaaattcgagctcagtctacagac
gatgaatacactctggatggcaggatatatgaactagatcttcagaccattgatgccaat
tcaacattgctattgaaccgtttctggacacctaccttcaaacctcatggctgtttttgt
gtgttcagctccatagagtcacttaattttattggtgattgcattgggataatcagggca
gaggcttcacaaaatagaagagacaaatatgtggcccagctgccatttattctaatattg
gcaaaccagcgggacagtgtttgcaaaaaccttcctattttaaggcatcagggccaacag
ctagcaaataagctgcagtgtacttttgtagacataccttccggtacatttccacgcaaa
tttaatgagacccaaataaaacaagctctgcgaggaatacttgaggcactaaagcacaac
tttgatgtcatgagcccgctgccttctattaaagacatgtcagagactgacttgcggatt
gtaatgtgtgccatgtgtggagatccatttagtgtggacctcattctttcgcctttcctg
gattcacattcctgtagtgctgctcaacctggtcaaaataacacactggttttggacaag
attattggtgatagtcgacgacgaatccaaattactatcctctcctatcactcttccatt
ggaataaggaaagatgagctagtccacggatatatcctagtttattcagcaaagcgcaaa
tcctccatggcaatgcttcgggcattcctagcagaggtacaggatgtgatccctgtccaa
atggtggctatcactgacagccaagcagacttctttgaaaatgaggccatcaaggagtta
atgactgagggagagcacatagccacagaaatcacggccaagtttactgcactgtattct
ctatctcagtatcatagacaaaccgaggtgttcacaccatttttcaatgaggtgctggaa
aagaagaacaatattgaaggttcctttttgtgtgacagcatcaaagattctacaaatgca
agtgaagacgtgttctcgcagtcaccccatggaaattcaccagtgtacaattactatcca
gattcagaggatgacactgaagcaccacctccatacagccctattggagatgacgtgcag
ttgcttccaacacccagcgaacgcgctaaatatcggattgatttggaaggaaatgagtat
cccattcacagcactccagtgaacccacatgacgatcgcaatcacaaagtgcctccagct
gtcagacccaagccagccatacccaagacaactgtgaagaaactggatccaaaccttgtt
aagaccattgaagcagggattgtgaaacacccaaggaaacaatcacgagtccctcttgcc
catggagaggatatagaggcatctgataactatgcagagccttctgatacactactaaag
tccaaaggctaccgcgatgacatttatgatgttccagaaaatagtcagaatcgaactgtc
aaaatgagaaacacctttggagggattcacgtcacacatggtgacgaggaaaatggcttt
gttcgaatgtcagagtcccatggtggaaggagaccttcaaaatacaaacaccggtccaag
atccttttcagcaaaactaaagcttatcatcagagagcacattcagacgccagcgatgat
gagactgggctttcgatacaaaagaaaaagaaaggtaggggccaccgtgggagtgaagag
gatccccttctttccccagttgacccatggaagggaggaatagataaccctgctattaca
tctgatcctgaacaagatgataaaaagctcaagaagaagaaacaaccaaagataaaagaa
cccaaaaagccaaaacaaaaggccacaaagcctctgtatccacctacccgaagaaactgg
gagagtaattactttggggttcctctccaggatcttgttactcttgagaaacctatccct
ctgttcattgaaaaatgtgtggattttattgaagctacaggattgctgactgagggttta
taccgtgtcagtggaaataagactgatcaagataatattcaaaagcagtttgaccaagac
cacagtgtggatctgatggcaatggatgtggcagtaaatgcagtggcgggagctcttaaa
gctttctttgctgacctgcctgatcctcttattccttacaatctacaccctgagctggtg
gaaacagccaaaatagttgacagaacagagcgtctgcaggtcctcaaggaaatagtgaag
aaattcccatctgtgaactatgaagtttttaagtatgtcattggtcacctgaaccgagtg
agccatcaaagcagaaccaacttcatgacggcagataatctctccatctgtttttggcct
accctgatgagaccagattttgaaaacaaggacacgctttctaccaccaaactcaatcag
tctgtcattgagtcctttattcagcagtgccagtacttcttttacaatggagaaattgta
gaaacgtccaaccctgtggcagcaccaccaccaacacagatgtctaatgctggacacatg
gtagaatccttggtaccactgcagctgccgcctccactacaacctcagctaattcaacat
caactacaagcagatcccttggtataa
DBGET
integrated database retrieval system
