Polyodon spathula (Mississippi paddlefish): 121324241
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Entry
121324241 CDS
T07273
Name
(RefSeq) ras and Rab interactor 3-like
KO
K23687
Ras and Rab interactor 2/3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121324241
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121324241
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Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
RA_3
RA_2
Motif
Other DBs
NCBI-GeneID:
121324241
NCBI-ProteinID:
XP_041121845
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All DBs
Position
12:12170825..12201709
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AA seq
933 aa
AA seq
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MMMKTSALALETGLPPGTAPEDYDQGGQACEPSSPRNQPLMPGISILEKLIKTCPVWLQL
GISPERASEILQREGAGIFLVKKNLNLKKMVLSVRFPDQNGAPHIQDILIKEEKTLLYLE
GSVLVFDDIFKLVAFYCVSRDVLPFTLSIPQVIKEATKYEHLETVSSLGSDFWGSSLNRR
VDVIKGCTLNSSNSSLQAGQHFSNDASQCSCEIELSIGNDRLWYVNPIFIEEYCNSLPST
APITRSLTTPNSMQPRYKRPPPIPPRTRTAGELFPSIREAKDPTSTVPSPQREEVKIGQN
EEGSNSVTQMAAKMESSVVEIKPQNNFRIPPVPPRRRLSEKFSEEAAVKEEITLLVENQG
DQVPVATLISIEALQETVENIPSPKGEELSKSSPVKEQPAVAQPESVPQNIQAVQQTSKK
TAPIPPPRRKKQMMASAKGLNSETSNSTATKEPSQNKLNVSPKSSSTPALTRRSLNLVEV
KVSDTSLYSPEGNPPSLDHDSYSTSSTEDDFEHRPAYPVKRQPTIMLDKAKQRLSMVSLP
NMFTIFLSADRKIQKKIIELAQDKDSYFGNLVQDYKAFTLESMKKHSSSTEMLQEIRQMM
TQLKCYLIQSTELQGLEETAGYSDDRLEAVIEAALCKSVLKPLKESIYTGLKEIHTNNSS
LKSLKENQQVVLNTTTTDLGVTTSVPETPVMEKIQQKFTSMHQAYSPEKKIATLLKTCKI
IYESMSIGCPGKPHGADDFLPVLMYVLVRSNLPALLLDVEYMMELMDPTLQLGEGSYYLT
TTYGALEHIKNYDKLAVTRQLSLEVQDSIHRWERRRTLNKARVSRSSVQDFINVSFNEAG
SNTKTLGTRPDTTAQDLCRQCAEKFEVPEPERYGLCVLVDGIYQQLGPQELPLAVKAMFH
HSEPRKEYYFVYKPVSPEEWKNIKPPLKTESLI
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgaaaacatctgcgctagctttggaaaccggactccctccagggacggcccca
gaagattatgaccagggtggccaggcctgtgaaccttcatctcccaggaatcagcctctc
atgcctggaatcagcatcctggagaaactcatcaagacctgccccgtgtggcttcagcta
ggcatcagtcctgagagagcctccgagatcctgcagcgagagggagctgggatttttctg
gtgaagaagaatttgaatctcaagaaaatggttctttctgttcgtttcccagaccagaat
ggagcgccacacatccaagacattctcatcaaagaagaaaagacattgctctatctggaa
ggttctgtccttgtgttcgatgacatttttaaattggttgccttctactgtgtcagcaga
gatgtgctgccgtttactctaagcataccccaggtaataaaagaggcaacgaagtatgaa
catcttgagactgtatcaagccttggatcagatttctggggttcttccctcaaccgaaga
gttgatgttatcaagggctgtaccctcaacagcagcaacagtagccttcaagctggccag
catttctctaatgatgcaagtcaatgctcatgtgagattgagctgtccataggaaatgac
aggctgtggtatgtaaatcctatttttatcgaagagtattgcaacagcctgccttcaact
gcacctattacaagaagcctgactactccaaattcaatgcagcccagatacaagagacct
cctcccataccgcccagaactcggacagcaggagagctgtttcctagcataagggaagct
aaggacccaacttctacagttcctagcccacaaagggaagaggtgaaaattgggcagaat
gaagaaggaagcaacagcgtgacacaaatggctgcgaagatggaaagcagcgtggtagaa
atcaagccccaaaataattttcggatacctccagttcctccaagaaggcgattgtctgaa
aagttctctgaagaggctgctgtcaaagaggaaattaccctgttagtggagaatcaaggt
gatcaagtacctgttgctactttgatcagtattgaagccctgcaagagactgtggaaaac
atcccttctcccaaaggagaggaactgtctaagtcaagcccagttaaggagcagcctgct
gttgcacaacctgaaagtgttcctcaaaacattcaggcagtccagcagacatctaaaaaa
acagccccaattcccccgccaaggaggaagaaacaaatgatggccagtgcaaagggactg
aattcagagacttcaaactcaacagcaacgaaagagccatcacaaaacaaactaaacgtc
tctcctaaaagctcaagcacccctgctctgacgcggaggtccttgaatttggtcgaagtc
aaggtttcagacacctccctctactcaccagaaggaaatccaccttctttggaccatgac
tcttattccacaagcagcacggaagacgattttgagcacagacctgcgtatcctgtgaag
agacaacccaccatcatgctggacaaggccaagcaacgcctctccatggtcagccttccc
aacatgttcaccatcttcctgtctgctgaccgcaagatccagaagaagatcatagagctg
gcacaggataaggactcctactttgggaacctggtgcaggattacaaagccttcaccctg
gaaagtatgaagaaacattcctccagtactgagatgttgcaggagatccggcagatgatg
acgcagctgaagtgctatttaatacagagcacagagctgcagggactggaggagactgct
ggttattccgacgacagattagaagctgtcattgaggctgcgttgtgcaaaagcgtcctg
aaacctctaaaggagtccatttacacaggcttgaaggaaatccatacgaataattcatct
ctgaagagtctcaaggagaaccagcaagtcgttctcaacaccaccactacagacctgggg
gtgaccaccagtgtgccggagacccccgtcatggagaagatccagcagaagtttacatcc
atgcaccaggcctactccccagagaagaagatagctaccctactgaagacatgcaagatt
atctacgaatccatgtccataggatgcccagggaagccgcatggtgctgatgatttcctg
ccagtgctgatgtacgtcctggtccgcagtaacctgcccgctctgctgctggatgtggag
tatatgatggagctaatggaccccacgctgcagctcggagaaggctcttactatttaacc
accacctacggtgccctggagcacattaagaattatgacaagctggcagtcactcggcag
ctcagcctggaggtccaggattccattcaccgctgggagcgccgcagaactctgaacaag
gccagagtctccaggtcgtcagtgcaggattttatcaacgtctcattcaatgaagcagga
tccaacacgaagactctggggacacggccagacaccacggctcaggacctgtgtcgacag
tgtgccgagaaattcgaggtcccggagcctgagaggtatgggctctgtgtgctggtggat
gggatataccaacaactgggtccacaggagctgcctctcgcagtcaaggccatgttccac
cacagcgagcccaggaaagagtattattttgtatacaagcctgtgagccctgaggagtgg
aaaaacatcaaaccaccactcaaaactgagagcttgatttga
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