Polyodon spathula (Mississippi paddlefish): 121324272
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Entry
121324272 CDS
T07273
Name
(RefSeq) transcriptional repressor protein YY1-like isoform X1
KO
K09201
transcription factor YY
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03082
ATP-dependent chromatin remodeling
pspa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121324272
03083 Polycomb repressive complex
121324272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121324272
03036 Chromosome and associated proteins [BR:
pspa03036
]
121324272
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121324272
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121324272
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
121324272
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
121324272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
TFIIIA_zf-C2H2
Raffinose_syn
IBR
Motif
Other DBs
NCBI-GeneID:
121324272
NCBI-ProteinID:
XP_041121916
LinkDB
All DBs
Position
12:complement(763274..773759)
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AA seq
396 aa
AA seq
DB search
MASGDTLYIATTDGSEMPAEIVELHEIEVETIPVETIETTVVGEEEEEEQEDDEHDQPMI
ALQPLVTDDPNQVHHHHHHHHHQEVILVQTREEVVGGDDSDLRADDGYEDQILIPVPAPV
AEEEYIEQTLVTVAGKSSSSSGGRVKKGGGGSGKKSGKKSYLSGAEASGRKWEQKQVQIK
TLEGEFSVTMWASDDKKDIDHETVVEEQIIGENSPPDYSEYMTGKKLPPGGIPGIDLSDP
KQLAEFASPFNSSECLMKREPTRMKPRKIKEDDAPRTIACPHKGCTKMFRDNSAMRKHLH
THGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHT
GDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgggcgacacgctctacatcgcgacgaccgacggctcggaaatgccggccgag
atcgtggagctccacgagatcgaggtggagaccatccccgtggaaacgatcgagaccacg
gtggtcggggaggaggaggaggaggagcaggaggacgacgagcacgaccagccgatgatc
gccctgcagccgctagtgacagacgacccgaaccaggtccaccaccaccaccaccaccac
caccaccaggaggtgatcctggtgcagaccagggaggaggtggtcggcggggacgactcg
gacctgcgggccgacgatggctatgaagatcagatcctcatcccggtcccggcaccggtc
gccgaggaggagtatatcgagcagacgctggtgacggtagccgggaaaagcagctcttcc
tcgggagggcgggtgaagaaaggggggggcggcagcgggaagaaatcgggtaaaaagagc
tacctgagcggggccgaggcaagcgggagaaaatgggagcagaagcaggtccagatcaag
accctggagggagagttttcagtaacgatgtgggcttcggatgacaaaaaggacattgac
catgagacggtggtggaagagcagattatcggagagaactctcctcctgattattcagag
tacatgaccggaaagaaactcccgccaggaggtatcccagggatcgacctctccgacccc
aaacagttagcagagtttgccagccccttcaatagcagtgaatgcctcatgaaacgggag
ccaactcggatgaagccgagaaaaataaaagaagacgacgccccaagaacgatagcatgt
ccccacaaaggctgcacaaagatgttcagggacaactctgccatgaggaagcacttgcac
actcacgggccgcgcgttcacgtttgtgctgaatgtgggaaagccttcgtggagagctca
aaactgaagcgacatcagctcgttcatactggagaaaaacctttccagtgcacgttcgag
ggatgtggaaagcgcttctcactggacttcaatttacgcactcatgtgcgaattcacacc
ggcgaccggccctatgtgtgccctttcgacggctgcaataagaagtttgctcagtcaact
aacctgaagtctcacatcttgacacacgccaaagccaaaaacaaccagtga
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