Polyodon spathula (Mississippi paddlefish): 121324306
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Entry
121324306 CDS
T07273
Name
(RefSeq) DNA repair protein XRCC3-like
KO
K10880
DNA-repair protein XRCC3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121324306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121324306
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
121324306
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad51
RecA
ATPase
AAA_25
RNA_pol_A_CTD
Motif
Other DBs
NCBI-GeneID:
121324306
NCBI-ProteinID:
XP_041121947
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All DBs
Position
12:4569877..4577507
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AA seq
218 aa
AA seq
DB search
MDWHQVELNPQVVHAVKRANVKTFREVLSLSGPDLQRLAKLSHADVHHLQKYTDVDDFTL
RGGIPLLGIVEISGERSAGKTQICLQLCLSAQYPRKYAGAVYICTEDTFPTKRLQQMSSL
QHKLRPEVPADVLKSITFCNNICVEHAGDVDSLNVCISKRVPILFSRGLVRLVVVDSIAA
LFRCEFEAKDALLRAKHLLAFRATLHSLSHRFKTPILC
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggactggcatcaggtagagctaaacccccaagtggtacacgctgttaagagagcaaat
gtgaaaacattccgggaggttttgagtctgtctggtcccgacttgcagagactggccaag
ctgtctcacgctgatgtgcatcacctgcagaaatacacagatgttgatgactttacattg
agggggggcatccccctgctgggtatcgtagagatatctggggagagatcagccggcaag
acccagatctgcttgcagctctgcttgtcagcgcagtacccccggaaatacgcaggggct
gtctacatctgcacagaagatactttcccaaccaagcgtttacagcagatgagcagtcta
cagcacaagctcaggccggaggtcccagctgatgttcttaagagcataacattttgcaac
aacatctgtgtcgaacatgcaggagacgtggactcgctgaatgtctgcatctcgaagcgg
gttccaatcctgttctccagaggactggtgcgcctggtcgtggttgattctatagcagct
ctgttccgctgtgagtttgaagccaaggacgcactcctgagagccaagcatctgttagca
ttcagagccacccttcacagcctgagccacagattcaagacacccattctgtgttaa
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