Polyodon spathula (Mississippi paddlefish): 121324323
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Entry
121324323 CDS
T07273
Symbol
exd1
Name
(RefSeq) LOW QUALITY PROTEIN: piRNA biogenesis protein EXD1
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121324323 (exd1)
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
121324323 (exd1)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
121324323
NCBI-ProteinID:
XP_041121981
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Position
12:11282493..11291782
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AA seq
620 aa
AA seq
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MDSTHDYHFLDYFKKKRVKLTLTNCSSYFGTVQRINLNRTVILEDVVDAESGRNLQGVKL
FFGHEIQNGMIEISHKSFLHVSNSRXGRGLEGQLTVAEFHPYRKNMECLCFSDDEEENVD
FVIIDQFQEKFGPAIIHIQNQRVIGVGVDGVGISQHERVCWMQISTKNQIYLFDILLLGA
RAFKNGLTRILEDSNILKVIHDCRGISGCLYHQYAVNLANIFDTQVADVMLFHMETGGFL
PERVSTLEECIIRHLKIASFRLSSLKLKAQLAEENSEAWYVRPSPVSLQRAMALSVIHLQ
PLRLVMLDALMSDYTSLVDTYLSMFREEPVDIQTGSQNTCLELPKELQELEFMQKQRREW
ALEHYKMNEDGLLVRSDPKPIKKSPGGSAQPLSVGRPQSHEPTVVEADVDAESIASVVEK
NPTEIHRPMTQKKIEPSDRDQGVTYVSKKAEQREVEVSEAADDFKGATEASGWAYVKLDQ
SSTRTLKSGISEGSPKSKRKQPPVKDPLTEMPIPSQEDSRPLAIVCSGTAEISEESRGHK
KPQVTREDAQAGVTLSSLEESISEVMVSPCIAEAHGVAQEDSASQPMYLSAGRGLFFQKP
ACSSIPLNLSFGALLRNGGH
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggattcgacacacgattatcactttttggattattttaagaagaagagggttaaatta
actctgacaaactgctcttcatattttgggacagtgcagcgaataaaccttaacagaaca
gtcattttggaagatgttgtcgatgctgaatctggaaggaacctgcaaggagttaaactt
ttttttggacatgaaatccaaaatggtatgattgaaatttcccataaaagtttcctacac
gtctcaaacagcagataaggacgaggtttagaggggcagctgaccgtagctgagtttcac
ccctacagaaagaatatggagtgtctgtgtttttcagatgacgaagaggaaaatgtcgac
tttgtgattatagatcagtttcaagagaaatttggacctgcaatcattcacattcagaat
cagcgagtgattggagttggggttgacggagttggcatctctcaacatgaaagggtctgc
tggatgcagatctctacaaaaaatcagatttatctgtttgacattctgctgcttggggca
cgagcatttaagaatgggctgacaaggattttggaagatagcaacatattaaaggtgatc
catgattgtcgaggtatctccggctgtttgtaccatcaatacgcagttaacttggccaac
atctttgatacacaggttgcagatgttatgctctttcacatggaaacgggtggcttccta
ccagagcgggtcagcactcttgaggagtgcattatccgccacctaaaaatagcctcgttc
cgcctctcttccttaaagctgaaagcacagctagctgaggagaacagtgaggcgtggtat
gtgcgtccttccccggtctctctgcagagagcgatggccttgtcagtgattcatctgcag
cccctgcgcctagtcatgctggacgcactgatgtctgactacaccagcctggtggacacc
tacctgagcatgtttcgggaggaacctgtcgatatccaaacaggcagtcagaatacctgc
cttgaacttcccaaagagcttcaggagctggagttcatgcagaaacaacgccgagagtgg
gctctggaacactacaaaatgaacgaagatggtctccttgtcaggtctgaccccaaaccc
attaagaaatctccagggggcagtgcacagcctcttagtgtaggtagaccacaaagccat
gaacccactgttgtggaagcagacgtagatgctgaaagcattgcaagtgtggtggagaag
aatccaactgaaatacacagacccatgacacaaaagaaaattgaaccctctgaccgggat
caaggagttacttatgtctccaagaaagctgagcaacgtgaagttgaggtcagtgaagct
gcagatgactttaagggggctactgaagcaagcgggtgggcttatgtcaaactggatcag
agctctacacgtaccctaaaatcagggatttctgaagggtcccccaaaagtaaaagaaaa
cagcctcctgtgaaagatccactgacagagatgccaattccatctcaagaagatagcaga
ccattggcgatagtatgctctgggactgctgaaatttctgaagagtcccgtggacataag
aaaccccaggtcaccagggaggatgcacaggcaggggtaacactttcttctctagaagaa
agcatttcagaggttatggtgagtccatgcattgcagaagctcatggcgtagctcaagaa
gacagtgcgtcacaacccatgtacctttcagcaggaagaggtctcttttttcagaaacca
gcgtgcagctcaatccctctgaatttatcctttggagcgttactgaggaacgggggacat
tga
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